RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ATP11CQ8NB49 1132 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 FAM156AQ8NDB6 213 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ICA1LQ8NDH6 482 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 CPT1BQ92523 772 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 E2F7Q96AV8 911 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PLEKHG4BQ96PX9 1271 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TCRBV9S1A1TA0A576 114 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 E9PBE3 544 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ALOX15BO15296 676 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 KLHL41O60662 606 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TM7SF2O76062 418 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 FOSP01100 380 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SMARCA1P28370 1054 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RPL22P35268 128 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SREBF1P36956 1147 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SLC1A1P43005 524 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 STT3AP46977 705 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PGGT1BP53609 377 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ACTR3P61158 418 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 MRPS22P82650 360 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 OGDHQ02218 1023 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 MMRN1Q13201 1228 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PRKD1Q15139 912 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PABPC1LQ4VXU2 614 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 EFHC1Q5JVL4 640 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RC3H1Q5TC82 1133 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 LIN9Q5TKA1 542 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 IL31Q6EBC2 164 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 CASC4Q6P4E1 433 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM179Q6ZVK1 233 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 AMIGO2Q86SJ2 522 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SDCCAG8Q86SQ7 713 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 NCAPG2Q86XI2 1143 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RFX6Q8HWS3 928 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RNF169Q8NCN4 708 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ZSCAN18Q8TBC5 510 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TMIGD2Q96BF3 282 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SIKE1Q9BRV8 207 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 POLR3CQ9BUI4 534 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 MIS12Q9H081 205 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 GLT8D2Q9H1C3 349 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SEMA6AQ9H2E6 1030 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 COPS7BQ9H9Q2 264 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RAVER2Q9HCJ3 691 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 DNAJC16Q9Y2G8 782 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 HEY1Q9Y5J3 304 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 A0A0J9YVX5 310 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DCXO43602 365 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 GRAP2O75791 330 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CYP3A7P24462 503 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 HADHBP55084 474 aaKnown RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CENPCQ03188 943 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 PPP2R5DQ14738 602 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TLR1Q15399 786 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CNGA3Q16281 694 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 UGCGQ16739 394 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CEP55Q53EZ4 464 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DPY19L2Q6NUT2 758 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CRLF3Q8IUI8 442 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TRIM42Q8IWZ5 723 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ALLCQ8N6M5 410 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DCAKDQ8WVC6 231 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ZBTB45Q96K62 511 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 MARK4Q96L34 752 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 FAM210AQ96ND0 272 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SLITRK1Q96PX8 696 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 S100A14Q9HCY8 104 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 PNPOQ9NVS9 261 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 FAM198AQ9UFP1 575 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TAGLN3Q9UI15 199 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ZHX2Q9Y6X8 837 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 COMMD3-BMI1R4GMX3 469 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SPATA31A6Q5VVP1 1343 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 IGLV3-22A0A075B6J6 115 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 FAM163BP0C2L3 166 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 UQCRBP14927 111 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 CD19P15391 556 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SERPINB5P36952 375 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 ETFBP38117 255 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 NCKAP1LP55160 1127 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 Q4G0T1 1027 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SPOCD1Q6ZMY3 1216 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TSHZ1Q6ZSZ6 1077 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 METTL25Q8N6Q8 603 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.142e-7■□□□□ 8.1
NEDD9-208ENST00000504387 ZFP28Q8NHY6 868 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 IL31RAQ8NI17 732 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 MORC4Q8TE76 937 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 DCAF4Q8WV16 495 aa7.93□□□□□ -1.14
NEDD9-208ENST00000504387 NR1H4Q96RI1 486 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 TUT1Q9H6E5 874 aaKnown RBP7.93□□□□□ -1.14
NEDD9-208ENST00000504387 GAKO14976 1311 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms