RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 KCTD20Q7Z5Y7 419 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 LIX1LQ8IVB5 337 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 DENND1AQ8TEH3 1009 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 TMEM171Q8WVE6 324 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 PPP2R3CQ969Q6 453 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 TTC17Q96AE7 1141 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 NELL2Q99435 816 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
SUB1-204ENST00000504016 TBC1D23Q9NUY8 699 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
SUB1-204ENST00000504016 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
SUB1-204ENST00000504016 NDRG4Q9ULP0 352 aaKnown RBP4.98□□□□□ -1.61
SUB1-204ENST00000504016 RHPN2P1A8MT19 583 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 TISP43B9A030 160 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 H7C4K7 107 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 PMM2O15305 246 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 NHLRC4P0CG21 123 aaPredicted RBP4.97□□□□□ -1.61
SUB1-204ENST00000504016 PCSK6P29122 969 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 CYP2C18P33260 490 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 CLCN2P51788 898 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 PRKAG1P54619 331 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 EEFSECP57772 596 aaKnown RBP4.97□□□□□ -1.61
SUB1-204ENST00000504016 LOXL3P58215 753 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 PTCHD3Q3KNS1 767 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 KLHDC7AQ5VTJ3 777 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 ZNF804AQ7Z570 1209 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 MICU3Q86XE3 530 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 FAM109AQ8N4B1 249 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 REPS1Q96D71 796 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 SUCLG2Q96I99 432 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 MOGAT1Q96PD6 335 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 PTDSS2Q9BVG9 487 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 SARGQ9BW04 601 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 DPH1Q9BZG8 443 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 ZNF518BQ9C0D4 1074 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 CXorf36Q9H7Y0 433 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 AS3MTQ9HBK9 375 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 A1CFQ9NQ94 594 aaKnown RBP4.97□□□□□ -1.61
SUB1-204ENST00000504016 ZSCAN32Q9NX65 697 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 SHOC2Q9UQ13 582 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 SSX2IPQ9Y2D8 614 aa4.97□□□□□ -1.61
SUB1-204ENST00000504016 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 ISM1B1AKI9 464 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 H0YIZ8 118 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 RAB27BO00194 218 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 ZNF213O14771 459 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 MOSPD3O75425 235 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 VNN1O95497 513 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 TUBB4AP04350 444 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 KRT18P05783 430 aaKnown RBP4.96□□□□□ -1.62
SUB1-204ENST00000504016 VIPR2P41587 438 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 MYO1EQ12965 1108 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 E2F2Q14209 437 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 SAFBQ15424 915 aaKnown RBP eCLIP4.96□□□□□ -1.62
SUB1-204ENST00000504016 LY6KQ17RY6 165 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 MGAT5BQ3V5L5 792 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 SUPT20HL1Q3ZLR7 823 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 PCID2Q5JVF3 399 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 CACHD1Q5VU97 1274 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 RRAGBQ5VZM2 374 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 ICE2Q659A1 982 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 IL31Q6EBC2 164 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 UNC13DQ70J99 1090 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 WDR53Q7Z5U6 358 aaPredicted RBP4.96□□□□□ -1.62
SUB1-204ENST00000504016 DTX2Q86UW9 622 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 BPIFB1Q8TDL5 484 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
SUB1-204ENST00000504016 ZNF48Q96MX3 618 aaPredicted RBP4.96□□□□□ -1.62
SUB1-204ENST00000504016 MESP1Q9BRJ9 268 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 NUP62CLQ9H1M0 184 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 GBA2Q9HCG7 927 aaPredicted RBP4.96□□□□□ -1.62
SUB1-204ENST00000504016 DDX21Q9NR30 783 aaKnown RBP eCLIP4.96□□□□□ -1.62
SUB1-204ENST00000504016 GJB4Q9NTQ9 266 aa4.96□□□□□ -1.62
SUB1-204ENST00000504016 PRRT4C9JH25 899 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 SLC16A3O15427 465 aaKnown RBP4.95□□□□□ -1.62
SUB1-204ENST00000504016 FRS3O43559 492 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 RGS10O43665 173 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 TLR5O60602 858 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 CAND2O75155 1236 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 RASAL1O95294 804 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 XRCC6P12956 609 aaKnown RBP eCLIP4.95□□□□□ -1.62
SUB1-204ENST00000504016 YY1P25490 414 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 LIPAP38571 399 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 NEK3P51956 506 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 TBX4P57082 545 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 SATB1Q01826 763 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 TREML2Q5T2D2 321 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 SFRP4Q6FHJ7 346 aaPredicted RBP4.95□□□□□ -1.62
SUB1-204ENST00000504016 SLC2A7Q6PXP3 512 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 MAVSQ7Z434 540 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 SLC15A3Q8IY34 581 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 CCDC33Q8N5R6 958 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 ATG4AQ8WYN0 398 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 SPSB4Q96A44 273 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 NMD3Q96D46 503 aaKnown RBP4.95□□□□□ -1.62
SUB1-204ENST00000504016 NAA15Q9BXJ9 866 aaKnown RBP4.95□□□□□ -1.62
SUB1-204ENST00000504016 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
SUB1-204ENST00000504016 DLL3Q9NYJ7 618 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms