RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CT47A1Q5JQC4 288 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 MIIPQ5JXC2 388 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 SNX30Q5VWJ9 437 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 ARHGAP17Q68EM7 881 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 GJB7Q6PEY0 223 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 RRAGAQ7L523 313 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TTC30AQ86WT1 665 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TTC39CQ8N584 583 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 CELF5Q8N6W0 485 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 PRSS33Q8NF86 280 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 FLCNQ8NFG4 579 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 BPIFB1Q8TDL5 484 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TFAP2BQ92481 460 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 CHFRQ96EP1 664 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 NT5C1BQ96P26 610 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 FAM83CQ9BQN1 747 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 DUSP16Q9BY84 665 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 INTS2Q9H0H0 1204 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 FAM124BQ9H5Z6 455 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 BRD9Q9H8M2 597 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TBC1D17Q9HA65 648 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TRPC7Q9HCX4 862 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 SAMSN1Q9NSI8 373 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TDP1Q9NUW8 608 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 COMMD8Q9NX08 183 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 OSER1Q9NX31 292 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 TRPM5Q9NZQ8 1165 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 DLGAP2Q9P1A6 1054 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 ZMYM5Q9UJ78 669 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 VPS13AQ96RL7 3174 aa7.61□□□□□ -1.19
PDLIM1-204ENST00000492511 ATP8B3O60423 1300 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TRAV19A0A0A6YYK7 116 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 KANSL1LA0AUZ9 987 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GOLGA6L22H0YM25 854 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 DPYSL4O14531 572 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 COCHO43405 550 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GFRA3O60609 400 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GABBR2O75899 941 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 RTN3O95197 1032 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 OAS1P00973 400 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 DCNP07585 359 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 USP17L7P0C7H9 530 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 HDCP19113 662 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TBXAS1P24557 533 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 PON1P27169 355 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 AVPR1AP37288 418 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 SOX9P48436 509 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 PPP3CCP48454 512 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 KIF11P52732 1056 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ZNF132P52740 706 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 SLC7A9P82251 487 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GCNT1Q02742 428 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TNK2Q07912 1038 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TCF15Q12870 199 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 IFRD2Q12894 506 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ZNF77Q15935 545 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 PKDCCQ504Y2 493 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TRIM68Q6AZZ1 485 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TMEM270Q6UE05 265 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 C11orf57Q6ZUT1 292 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 CREBRFQ8IUR6 639 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 PPM1KQ8N3J5 372 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ANKRD52Q8NB46 1076 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 TTC8Q8TAM2 541 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ENOX1Q8TC92 643 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 OVCA2Q8WZ82 227 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ATOH1Q92858 354 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 DNASE1L2Q92874 299 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 IRF7Q92985 503 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 FBXO32Q969P5 355 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ZFRQ96KR1 1074 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 CRACR2AQ9BSW2 395 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 UBXN6Q9BZV1 441 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 LINC00597Q9H2U6 94 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 MFSD1Q9H3U5 465 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 NMUR1Q9HB89 426 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 SIX2Q9NPC8 291 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 HPS4Q9NQG7 708 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GKN1Q9NS71 199 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GTSE1Q9NYZ3 720 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 EHD2Q9NZN4 543 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 GMIPQ9P107 970 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 DACH1Q9UI36 760 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 AJAP1Q9UKB5 411 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ARHGAP26Q9UNA1 814 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 CNTN6Q9UQ52 1028 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 SCML2Q9UQR0 700 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 USP3Q9Y6I4 520 aa7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 ZFHX2Q9C0A1 2572 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-204ENST00000492511 USP34Q70CQ2 3546 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SPTBN4Q9H254 2564 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 BECN2A8MW95 431 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 LEFTY2O00292 366 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 O00370 1275 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 STK25O00506 426 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CYP26A1O43174 497 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TBX18O95935 607 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 MBD3O95983 291 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms