RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 DBX2Q6ZNG2 339 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 C12orf40Q86WS4 652 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 TMPRSS12Q86WS5 348 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 FOXJ1Q92949 421 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 MIR1-1HGQ9H1L0 117 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 TUFT1Q9NNX1 390 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 CD93Q9NPY3 652 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 UXTQ9UBK9 157 aaPredicted RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 UBQLN1Q9UMX0 589 aaKnown RBP10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 ANK1P16157 1881 aa10.44□□□□□ -0.74
SMARCB1-206ENST00000477836 RELNP78509 3460 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 A0A0A0MRY4 1105 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 MEI4A8MW99 385 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 BTBD18B2RXH4 712 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 PRPF40AO75400 957 aaKnown RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 C6P13671 934 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 JUPP14923 745 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 TCF3P15923 654 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 HDCP19113 662 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 NDUFV2P19404 249 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 CYP3A5P20815 502 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 EIF2DP41214 584 aaKnown RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 NPTX2P47972 431 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 CSRP3P50461 194 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 CLDN6P56747 220 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 KRT85P78386 507 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ZXDBP98169 803 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 TLE3Q04726 772 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 CCDC173Q0VFZ6 552 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 SUZ12Q15022 739 aaKnown RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 DHCR24Q15392 516 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ZBTB6Q15916 424 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 DDR2Q16832 855 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 PTPRNQ16849 979 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 COLEC12Q5KU26 742 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 IL27RAQ6UWB1 636 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 CLEC17AQ6ZS10 378 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 TRMT11Q7Z4G4 463 aaKnown RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 FILIP1Q7Z7B0 1213 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 METTL23Q86XA0 190 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ADGRG2Q8IZP9 1017 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ZNF513Q8N8E2 541 aaPredicted RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 WBP1Q96G27 269 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ZNF396Q96N95 335 aaPredicted RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 FOXP1Q9H334 677 aaPredicted RBP10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 TMEM134Q9H6X4 195 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 GCNT4Q9P109 453 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 ARHGAP26Q9UNA1 814 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 PCDHB5Q9Y5E4 795 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 PCDHGB2Q9Y5G2 931 aa10.43□□□□□ -0.74
SMARCB1-206ENST00000477836 NBPF19A0A087WUL8 3843 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 MYO18AQ92614 2054 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 A0A1W2PQF6 199 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 TBC1D3BA6NDS4 549 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 LEFTY2O00292 366 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 SCAMP3O14828 347 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 NEMFO60524 1076 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 CYP11A1P05108 521 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 PTMSP20962 102 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 HNF1BP35680 557 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 TNFSF9P41273 254 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 BNC1Q01954 994 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 RHDQ02161 417 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 DNM1Q05193 864 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 SPACA3Q8IXA5 215 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 TRMT2BQ96GJ1 504 aaKnown RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 SLC6A17Q9H1V8 727 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 PLEKHA5Q9HAU0 1116 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 KMT5AQ9NQR1 393 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 TMLHEQ9NVH6 421 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 GMIPQ9P107 970 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 DSEQ9UL01 958 aa10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.42□□□□□ -0.74
SMARCB1-206ENST00000477836 ANAPC1Q9H1A4 1944 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 TTC26A0AVF1 554 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 LACTBL1A8MY62 500 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 BCAT2O15382 392 aaPredicted RBP10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 TOM1L1O75674 476 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 NOL4O94818 638 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 KRT10P13645 584 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 NTSR1P30989 418 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 NR5A1Q13285 461 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 FAM173BQ6P4H8 233 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 RHBDF2Q6PJF5 856 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 PRICKLE2Q7Z3G6 844 aa10.41□□□□□ -0.74
SMARCB1-206ENST00000477836 FSIP1Q8NA03 581 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms