RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.35	□□□□□ -0.59	6e-18	■□□□□ 9.1
RPS18-231	ENST00000472218	DDX56	Q9NY93	547 aa	Known RBP	11.35	□□□□□ -0.59
RPS18-231	ENST00000472218	MTRR	Q9UBK8	725 aa		11.35	□□□□□ -0.59
RPS18-231	ENST00000472218	PCDHB5	Q9Y5E4	795 aa		11.35	□□□□□ -0.59
RPS18-231	ENST00000472218	PCDHB12	Q9Y5F1	795 aa		11.35	□□□□□ -0.59
RPS18-231	ENST00000472218	COL4A6	Q14031	1691 aa		11.35	□□□□□ -0.59
RPS18-231	ENST00000472218		F8W810	466 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	PGRMC1	O00264	195 aa	Known RBP	11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	C1R	P00736	705 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	ACR	P10323	421 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	GPD1	P21695	349 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	PSMA2	P25787	234 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	RFC1	P35251	1148 aa	Predicted RBP	11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	MAP3K7CL	P57077	242 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	COPS2	P61201	443 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	RPL7A	P62424	266 aa	Known RBP	11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	DSG1	Q02413	1049 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	KRT17	Q04695	432 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	RASIP1	Q5U651	963 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	TPGS2	Q68CL5	300 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	OTOP2	Q7RTS6	562 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	LRRTM3	Q86VH5	581 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	KATNAL2	Q8IYT4	538 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	C7orf61	Q8IZ16	206 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	FIBCD1	Q8N539	461 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	ZMIZ2	Q8NF64	920 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	EXD1	Q8NHP7	514 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	MAIP1	Q8WWC4	291 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	SPATA17	Q96L03	361 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	TBCB	Q99426	244 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	1e-12	■■■■■ 28.4
RPS18-231	ENST00000472218	FBXO44	Q9H4M3	255 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	METTL5	Q9NRN9	209 aa	Known RBP	11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	EHD2	Q9NZN4	543 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	LZTS1	Q9Y250	596 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	EFR3B	Q9Y2G0	817 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	NR2E3	Q9Y5X4	410 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	USP3	Q9Y6I4	520 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	SLC4A7	Q9Y6M7	1214 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	SCN5A	Q14524	2016 aa		11.34	□□□□□ -0.59
RPS18-231	ENST00000472218	ZBBX	A8MT70	800 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	HHLA1	C9JL84	531 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	GOLGA8S	H3BPF8	625 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	CCDC188	H7C350	402 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	TULP2	O00295	520 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	CLDN5	O00501	218 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	NCK2	O43639	380 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	TADA3	O75528	432 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	DAB1	O75553	588 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	GABBR2	O75899	941 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	ZBED1	O96006	694 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	PDGFRA	P16234	1089 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SDC4	P31431	198 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	PTPN7	P35236	360 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	MATK	P42679	507 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	GLUD2	P49448	558 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	RGS7	P49802	495 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	TKTL1	P51854	596 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	RPL10A	P62906	217 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	YWHAZ	P63104	245 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	ADCY1	Q08828	1119 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SLC39A12	Q504Y0	691 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	BOLA3	Q53S33	107 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	C2CD6	Q53TS8	623 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SPOUT1	Q5T280	376 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SEL1L2	Q5TEA6	688 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	KIAA1841	Q6NSI8	718 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	STRADA	Q7RTN6	431 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	PSTK	Q8IV42	348 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	HERC6	Q8IVU3	1022 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SCUBE3	Q8IX30	993 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	RCOR2	Q8IZ40	523 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	ARHGAP18	Q8N392	663 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	COG1	Q8WTW3	980 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	RUBCN	Q92622	972 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	CENPI	Q92674	756 aa	Predicted RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	GOLGA1	Q92805	767 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	NT5C3B	Q969T7	300 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	RBM41	Q96IZ5	413 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	SLC2A13	Q96QE2	648 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	LPIN3	Q9BQK8	851 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	DDX23	Q9BUQ8	820 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	CARD6	Q9BX69	1037 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	PRDM16	Q9HAZ2	1276 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	IL37	Q9NZH6	218 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	FNIP2	Q9P278	1114 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	STAP1	Q9ULZ2	295 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	MRPL42	Q9Y6G3	142 aa	Known RBP	11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	ALPK3	Q96L96	1907 aa		11.33	□□□□□ -0.6
RPS18-231	ENST00000472218	GOLGA6L10	A0A0M3HER8	536 aa		11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	TMEM110-MUSTN1	A8MSY1	372 aa		11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	ZNF487	B1APH4	448 aa		11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	BEST1	O76090	585 aa		11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	ENDOD1	O94919	500 aa		11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	RTN3	O95197	1032 aa	Predicted RBP	11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
RPS18-231	ENST00000472218	ATP2A2	P16615	1042 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms