RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 FOXN2P32314 431 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
COPS7B-217ENST00000461350 DNAJC3Q13217 504 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 RHBDF2Q6PJF5 856 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 ZNF365Q70YC5 407 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 ZMAT2Q96NC0 199 aaKnown RBP11.76□□□□□ -0.53
COPS7B-217ENST00000461350 MYLK2Q9H1R3 596 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 KIF9Q9HAQ2 790 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 GTF2IRD1Q9UHL9 959 aa11.76□□□□□ -0.53
COPS7B-217ENST00000461350 SMNDC1O75940 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CYP1A2P05177 515 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 GNAT1P11488 350 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CCNB1P14635 433 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 HOXC8P31273 242 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ASPAP45381 313 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ZNF449Q6P9G9 518 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 GRK7Q8WTQ7 553 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 GRAMD1AQ96CP6 724 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 YIPF3Q9GZM5 350 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 UPF3AQ9H1J1 476 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 UVRAGQ9P2Y5 699 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 SCN1AP35498 2009 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 GJC1P36383 396 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 GRM5P41594 1212 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 PTK6Q13882 451 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 PRUNE1Q86TP1 453 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 C18orf25Q96B23 403 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 SMYD3Q9H7B4 428 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 HAO1Q9UJM8 370 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 FAM47DPA6NHR8 397 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 RECQL4O94761 1208 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 MAN1A1P33908 653 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 SKIV2L2P42285 1042 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 RNASELQ05823 741 aaKnown RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CLEC16AQ2KHT3 1053 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CXorf38Q8TB03 319 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 LRRC37BQ96QE4 947 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 OSBPL1AQ9BXW6 950 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ASB7Q9H672 318 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 NKX1-2Q9UD57 310 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-217ENST00000461350 TUBGCP4Q9UGJ1 667 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 CDY2AQ9Y6F7 541 aa11.75□□□□□ -0.53
COPS7B-217ENST00000461350 ENO4A6NNW6 628 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 H0Y3Z8 333 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 PPEF2O14830 753 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 IVDP26440 423 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 PCK1P35558 622 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 RAD23BP54727 409 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 CDC42EP1Q00587 391 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 CAV1Q03135 178 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 NFX1Q12986 1120 aaKnown RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 BLMHQ13867 455 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 DCAF4L1Q3SXM0 396 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 ZNF667Q5HYK9 610 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 UBR7Q8N806 425 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 UTP4Q969X6 686 aaKnown RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 MRRFQ96E11 262 aaKnown RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 DPP3Q9NY33 737 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 R3HDM2Q9Y2K5 976 aaKnown RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 KPNA6O60684 536 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 RRM1P23921 792 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 ALDH3A1P30838 453 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 IZUMO3Q5VZ72 239 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 ACAD10Q6JQN1 1059 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 CAPN12Q6ZSI9 719 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 GSTA5Q7RTV2 222 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 ATL2Q8NHH9 583 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
COPS7B-217ENST00000461350 CORO1CQ9ULV4 474 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-217ENST00000461350 EXOC1LA0A1B0GW35 172 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 POC1B-GALNT4F8VUJ3 575 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 UPP2O95045 317 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 UNGP13051 313 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-217ENST00000461350 WDR4P57081 412 aaKnown RBP11.73□□□□□ -0.53
COPS7B-217ENST00000461350 BPIFB4P59827 614 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 STAT4Q14765 748 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-217ENST00000461350 ZNF606Q8WXB4 792 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 NUDCD1Q96RS6 583 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
COPS7B-217ENST00000461350 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms