RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CENPXA8MT69 81 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TM9SF1O15321 606 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 HLA-DRAP01903 254 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 RBP5P82980 135 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CLEC16AQ2KHT3 1053 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 KRT78Q8N1N4 520 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 WDR60Q8WVS4 1066 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 SH2D3AQ9BRG2 576 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 PDE9AO76083 593 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CPSF4O95639 269 aaKnown RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 FASP25445 335 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CDC16Q13042 620 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 SVOPQ8N4V2 548 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 C1orf131Q8NDD1 294 aaKnown RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 IARS2Q9NSE4 1012 aaKnown RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 HOXC10Q9NYD6 342 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 ATP6V1HQ9UI12 483 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 C1DQ13901 141 aaKnown RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 B3GNT6Q6ZMB0 384 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CROCCP3Q8IVE0 287 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 SEPHS2Q99611 448 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 FRMD8Q9BZ67 464 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 CAPN10Q9HC96 672 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 SLC44A2Q8IWA5 706 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 OR6Y1Q8NGX8 325 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 CATSPERBQ9H7T0 1116 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 TRIM39Q9HCM9 518 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 ATP7AQ04656 1500 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 SNAP23O00161 211 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 PIK3R1P27986 724 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 PAPD7Q5XG87 772 aaKnown RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 KRT77Q7Z794 578 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 LINC00523Q86TU6 105 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 TMPRSS6Q8IU80 811 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 TMEM51Q9NW97 253 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 CHKBQ9Y259 395 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 ATP7BP35670 1465 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 ELF3P78545 371 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 Q4G0T1 1027 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 ZNF618Q5T7W0 954 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 RIPOR1Q6ZS17 1223 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 USP49Q70CQ1 688 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 KYQ8NBH2 561 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 WDR36Q8NI36 951 aaKnown RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 STK32AQ8WU08 396 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 SPATA16Q9BXB7 569 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 PACSIN1Q9BY11 444 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 TRMT6Q9UJA5 497 aaKnown RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 CYP4Z1Q86W10 505 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 VPS33AQ96AX1 596 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 ERGIC2Q96RQ1 377 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 MYCP01106 439 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 IRF1P10914 325 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 EPB42P16452 691 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 GSTT1P30711 240 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 TWF1Q12792 350 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 HLFQ16534 295 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 OXNAD1Q96HP4 312 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-207ENST00000424408 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
LAMA4-207ENST00000424408 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
LAMA4-207ENST00000424408 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
LAMA4-207ENST00000424408 AGKQ53H12 422 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 DCAF6Q58WW2 860 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 ACTRT1Q8TDG2 376 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 FIG4Q92562 907 aa12.49□□□□□ -0.41
LAMA4-207ENST00000424408 SRPK1Q96SB4 655 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms