RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SMARCD1Q96GM5 515 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 PCDH9Q9HC56 1237 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 XYLBO75191 536 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 HPCAP84074 193 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 FAM47EQ6ZV65 393 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 SAMD7Q7Z3H4 446 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 ABRAQ8N0Z2 381 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 SKA1Q96BD8 255 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 MRPL46Q9H2W6 279 aaKnown RBP16.21■□□□□ 0.19
GNE-202ENST00000396594 PABPC3Q9H361 631 aaKnown RBP16.21■□□□□ 0.19
GNE-202ENST00000396594 ETNK1Q9HBU6 452 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 H0Y626 953 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 SLC9A3R1O14745 358 aaPredicted RBP16.21■□□□□ 0.19
GNE-202ENST00000396594 NTRK3Q16288 839 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 SCARA3Q6AZY7 606 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 LVRNQ6Q4G3 990 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 ARL8AQ96BM9 186 aa16.21■□□□□ 0.19
GNE-202ENST00000396594 FAM237AA0A1B0GTK4 181 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.18
GNE-202ENST00000396594 KLRC1P26715 233 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 PGM1P36871 562 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 SKP1P63208 163 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 MAP4K3Q8IVH8 894 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 E2F7Q96AV8 911 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 FAM161BQ96MY7 647 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 DERAQ9Y315 318 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.18
GNE-202ENST00000396594 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 M0QYT0 321 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 MEFVO15553 781 aaPredicted RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 RHOBTB1O94844 696 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 HMGCRP04035 888 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 RPN2P04844 631 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 ALDH2P05091 517 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PCSK2P16519 638 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PRRG3Q9BZD7 231 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 SLC13A1Q9BZW2 595 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 AGPAT5Q9NUQ2 364 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 H3BMM5 538 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 EPHB2P29323 1055 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 ITGA8P53708 1063 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PURAQ00577 322 aaKnown RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 LAMTOR4Q0VGL1 99 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 GRIK4Q16099 956 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PABPC1LQ4VXU2 614 aaKnown RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 LRRC6Q86X45 466 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 CHP1Q99653 195 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 LATS2Q9NRM7 1088 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 DDIT4Q9NX09 232 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 DISP2A7MBM2 1401 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 H3BRB1 525 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 PDGFRBP09619 1106 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 CUL3Q13618 768 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 ARID5BQ14865 1188 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 TUT1Q9H6E5 874 aaKnown RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 ENOPH1Q9UHY7 261 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 TBC1D4O60343 1298 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 ALDH1A2O94788 518 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 GNRH1P01148 92 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 ILKAPQ9H0C8 392 aaPredicted RBP16.2■□□□□ 0.18
GNE-202ENST00000396594 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.2■□□□□ 0.18
GNE-202ENST00000396594 SOX13Q9UN79 622 aa16.2■□□□□ 0.18
GNE-202ENST00000396594 F8VZ95 297 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 ADCY3O60266 1144 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 HOXB6P17509 224 aaKnown RBP16.19■□□□□ 0.18
GNE-202ENST00000396594 KCNA4P22459 653 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 CES1P23141 567 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 PEX6Q13608 980 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 PRMT9Q6P2P2 845 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 C3orf62Q6ZUJ4 267 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 RNF217Q8TC41 542 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 C1QTNF7Q9BXJ2 289 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 SUPT3HB4E1H0 165 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
GNE-202ENST00000396594 CCR1P32246 355 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 AIF1P55008 147 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 PLPPR4Q7Z2D5 763 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 MYO1HQ8N1T3 1032 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 SLC30A5Q8TAD4 765 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
GNE-202ENST00000396594 INTS13Q9NVM9 706 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 TRIM16O95361 564 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
GNE-202ENST00000396594 CDK16Q00536 496 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 WLSQ5T9L3 541 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 KDM7AQ6ZMT4 941 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 RGS9BPQ6ZS82 235 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 TTC30AQ86WT1 665 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 PARP9Q8IXQ6 854 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 TTC30BQ8N4P2 665 aa16.19■□□□□ 0.18
GNE-202ENST00000396594 SNX31Q8N9S9 440 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms