RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ADCY8P40145 1251 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 ARSEP51690 589 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 ITGA8P53708 1063 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 CAV1Q03135 178 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 PTK7Q13308 1070 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 LPIN1Q14693 890 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 WSCD1Q658N2 575 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 ALLCQ8N6M5 410 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 CFAP57Q96MR6 1250 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 DNAI2Q9GZS0 605 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 SEMA4AQ9H3S1 761 aa17.43■□□□□ 0.38
CCDC40-201ENST00000269318 HMGB1P1B2RPK0 211 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ATP2C2O75185 946 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CAPN15O75808 1086 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ITGAVP06756 1048 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 MYZAPP0CAP1 466 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 GHRP10912 638 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 SCNN1AP37088 669 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 EIF3BP55884 814 aaKnown RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ITGA7Q13683 1181 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 FAM26DQ5JW98 314 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 UBAP2Q5T6F2 1119 aaKnown RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ZNF771Q7L3S4 317 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 PRUNE1Q86TP1 453 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 GLIS1Q8NBF1 620 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 KCTD6Q8NC69 237 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CD99L2Q8TCZ2 262 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 HSPH1Q92598 858 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 HAUS1Q96CS2 278 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 HNRNPABQ99729 332 aaKnown RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 LRRC4CQ9HCJ2 640 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 TRMT13Q9NUP7 481 aaKnown RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 GOLGA6L10A6NI86 522 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CST8O60676 142 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CABYRO75952 493 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 TOMM70O94826 608 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 VPS41P49754 854 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 SCNN1GP51170 649 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CLCNKBP51801 687 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ACLYP53396 1101 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 EMC10Q5UCC4 262 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 SLC26A9Q7LBE3 791 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ARCQ7LC44 396 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 GSTA5Q7RTV2 222 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 RNF180Q86T96 592 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 CLEC4CQ8WTT0 213 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 HSFY1Q96LI6 401 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 C11orf84Q9BUA3 381 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 FRMD8P1Q9BZ68 369 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
CCDC40-201ENST00000269318 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.42■□□□□ 0.38
CCDC40-201ENST00000269318 XPO1O14980 1071 aaKnown RBP17.41■□□□□ 0.38
CCDC40-201ENST00000269318 SHBGP04278 402 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 SDC4P31431 198 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 CHKAP35790 457 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 ACADSBP45954 432 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 RAB27AP51159 221 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 ATP11AP98196 1134 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 CDO1Q16878 200 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 KIAA0319Q5VV43 1072 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 DENND2CQ68D51 928 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 PAQR9Q6ZVX9 377 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 TTC13Q8NBP0 860 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 BBOF1Q8ND07 529 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 CCHCR1Q8TD31 782 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 SENP8Q96LD8 212 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
CCDC40-201ENST00000269318 A0A0U1RQF3 1178 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 RIPK2O43353 540 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 PTPN1P18031 435 aaKnown RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 HOXD10P28358 340 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 DYNLT1P63172 113 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 SKOR1P84550 965 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 OTUD4Q01804 1114 aaKnown RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 SLC29A2Q14542 456 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 FAM172AQ8WUF8 416 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 PKNOX2Q96KN3 472 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 DUSP16Q9BY84 665 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 RSAD1Q9HA92 442 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 SAE1Q9UBE0 346 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 SHOX2O60902 331 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 LCP1P13796 627 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 RPL9P32969 192 aaKnown RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 PTPN9P43378 593 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 DPYSL3Q14195 570 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 UPP1Q16831 310 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 IZUMO3Q5VZ72 239 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 HIBCHQ6NVY1 386 aaPredicted RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 TRMT10CQ7L0Y3 403 aaKnown RBP17.4■□□□□ 0.38
CCDC40-201ENST00000269318 PXYLP1Q8TE99 480 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 TEKT4Q8WW24 435 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 TSPYL1Q9H0U9 437 aa17.4■□□□□ 0.38
CCDC40-201ENST00000269318 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms