RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP9YDL030W YNL217WP40152 326 aa3.24□□□□□ -1.89
PRP9YDL030W PGU1P47180 361 aa3.24□□□□□ -1.89
PRP9YDL030W YGR018CP53211 109 aa3.24□□□□□ -1.89
PRP9YDL030W TOM7P53507 60 aa3.24□□□□□ -1.89
PRP9YDL030W DAD1Q12248 94 aa3.24□□□□□ -1.89
PRP9YDL030W YOR097CQ12274 175 aaPredicted RBP3.24□□□□□ -1.89
PRP9YDL030W YCR050CP25630 102 aa3.23□□□□□ -1.89
PRP9YDL030W LST8P41318 303 aa3.23□□□□□ -1.89
PRP9YDL030W YGR164WP53291 111 aa3.23□□□□□ -1.89
PRP9YDL030W HST4P53688 370 aa3.23□□□□□ -1.89
PRP9YDL030W LSM6Q06406 86 aaKnown RBP3.23□□□□□ -1.89
PRP9YDL030W YHL018WP38744 120 aaPredicted RBP3.22□□□□□ -1.89
PRP9YDL030W SVP26P38869 228 aa3.22□□□□□ -1.89
PRP9YDL030W MRPL49P40858 161 aaPredicted RBP3.22□□□□□ -1.89
PRP9YDL030W MGR2Q02889 113 aa3.22□□□□□ -1.89
PRP9YDL030W GPI19Q04082 140 aa3.22□□□□□ -1.89
PRP9YDL030W API2Q04413 109 aa3.22□□□□□ -1.89
PRP9YDL030W YNL277W-AQ3E7Z0 62 aa3.22□□□□□ -1.89
PRP9YDL030W RPL2AP0CX45 254 aaKnown RBP3.21□□□□□ -1.89
PRP9YDL030W RPL2BP0CX46 254 aaKnown RBP3.21□□□□□ -1.89
PRP9YDL030W YHR214C-DP0CX93 97 aa3.21□□□□□ -1.89
PRP9YDL030W YBL071CP38185 102 aa3.21□□□□□ -1.89
PRP9YDL030W PET8P38921 284 aa3.21□□□□□ -1.89
PRP9YDL030W SFT1P43682 97 aa3.21□□□□□ -1.89
PRP9YDL030W SKI6P46948 246 aaPredicted RBP3.21□□□□□ -1.89
PRP9YDL030W MMS2P53152 137 aa3.21□□□□□ -1.89
PRP9YDL030W DAD4P69851 72 aa3.21□□□□□ -1.89
PRP9YDL030W MSA1Q08471 629 aa3.21□□□□□ -1.89
PRP9YDL030W YPL038W-AQ3E7B4 63 aa3.21□□□□□ -1.89
PRP9YDL030W YHR139C-AO13536 103 aa3.21□□□□□ -1.9
PRP9YDL030W YHR140WP38842 239 aa3.21□□□□□ -1.9
PRP9YDL030W YIL086CP40503 102 aa3.21□□□□□ -1.9
PRP9YDL030W KSH1Q8TGJ3 72 aa3.21□□□□□ -1.9
PRP9YDL030W YKR032WP36127 104 aa3.2□□□□□ -1.9
PRP9YDL030W SMP1P38128 452 aa3.2□□□□□ -1.9
PRP9YDL030W HUA1P40325 198 aa3.2□□□□□ -1.9
PRP9YDL030W TOS6P48560 102 aa3.2□□□□□ -1.9
PRP9YDL030W YGR219WP53307 113 aa3.2□□□□□ -1.9
PRP9YDL030W IGO2Q9P305 131 aa3.2□□□□□ -1.9
PRP9YDL030W PFY1P07274 126 aa3.19□□□□□ -1.9
PRP9YDL030W FIP1P45976 327 aa3.19□□□□□ -1.9
PRP9YDL030W CIS3P47001 227 aa3.19□□□□□ -1.9
PRP9YDL030W VPS55P47111 140 aa3.19□□□□□ -1.9
PRP9YDL030W SHH4Q06236 168 aa3.19□□□□□ -1.9
PRP9YDL030W YPL261CQ08976 102 aa3.19□□□□□ -1.9
PRP9YDL030W Q0255P03881 472 aa3.18□□□□□ -1.9
PRP9YDL030W YEL067CP39978 195 aa3.18□□□□□ -1.9
PRP9YDL030W YMR141CP40211 102 aa3.18□□□□□ -1.9
PRP9YDL030W YNR077CP53758 84 aa3.18□□□□□ -1.9
PRP9YDL030W MIX14Q04341 121 aa3.18□□□□□ -1.9
PRP9YDL030W RRS1Q08746 203 aaKnown RBP3.18□□□□□ -1.9
PRP9YDL030W YLR342W-AQ3E810 57 aa3.18□□□□□ -1.9
PRP9YDL030W RPL28P02406 149 aaKnown RBP3.17□□□□□ -1.9
PRP9YDL030W HMRA2P0CY13 119 aa3.17□□□□□ -1.9
PRP9YDL030W SWS2P53937 143 aa3.17□□□□□ -1.9
PRP9YDL030W COA3Q3E7B2 85 aa3.17□□□□□ -1.9
PRP9YDL030W YAR029WP39549 74 aa3.17□□□□□ -1.9
PRP9YDL030W PEX22P39718 180 aa3.17□□□□□ -1.9
PRP9YDL030W RRT13P40042 185 aa3.17□□□□□ -1.9
PRP9YDL030W SPI1P40092 148 aa3.17□□□□□ -1.9
PRP9YDL030W TIM22Q12328 207 aa3.17□□□□□ -1.9
PRP9YDL030W YMR175W-AQ3E766 64 aa3.17□□□□□ -1.9
PRP9YDL030W RPS14AP06367 137 aaKnown RBP3.16□□□□□ -1.9
PRP9YDL030W BET1P22804 142 aa3.16□□□□□ -1.9
PRP9YDL030W RPS14BP39516 138 aaKnown RBP3.16□□□□□ -1.9
PRP9YDL030W RSM19P53733 91 aaPredicted RBP3.16□□□□□ -1.9
PRP9YDL030W YLR194CQ05777 254 aa3.16□□□□□ -1.9
PRP9YDL030W YOR032W-AQ8TGS1 66 aa3.16□□□□□ -1.9
PRP9YDL030W CCW14O13547 238 aa3.15□□□□□ -1.91
PRP9YDL030W DSE2P38844 325 aa3.15□□□□□ -1.91
PRP9YDL030W YFL051CP43552 160 aa3.15□□□□□ -1.91
PRP9YDL030W ECO1P43605 281 aa3.15□□□□□ -1.91
PRP9YDL030W KEG1P43614 200 aa3.15□□□□□ -1.91
PRP9YDL030W IMP2P46972 177 aa3.15□□□□□ -1.91
PRP9YDL030W GAT3Q07928 141 aa3.15□□□□□ -1.91
PRP9YDL030W EMC6Q12431 108 aa3.15□□□□□ -1.91
PRP9YDL030W YDR381C-AQ3E6R5 114 aa3.15□□□□□ -1.91
PRP9YDL030W CDC39P25655 2108 aaKnown RBP3.14□□□□□ -1.91
PRP9YDL030W YDL022C-AP0C5L6 82 aa3.14□□□□□ -1.91
PRP9YDL030W YHR213WP0CI67 198 aa3.14□□□□□ -1.91
PRP9YDL030W RPL18AP0CX49 186 aaKnown RBP3.14□□□□□ -1.91
PRP9YDL030W RPL18BP0CX50 186 aaKnown RBP3.14□□□□□ -1.91
PRP9YDL030W UBC4P15731 148 aa3.14□□□□□ -1.91
PRP9YDL030W YRA2P36036 203 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
PRP9YDL030W MRPL39P36533 70 aa3.14□□□□□ -1.91
PRP9YDL030W RRT1P38192 103 aa3.14□□□□□ -1.91
PRP9YDL030W YER084WP40057 128 aa3.14□□□□□ -1.91
PRP9YDL030W YIA6P40556 373 aa3.14□□□□□ -1.91
PRP9YDL030W YOR008C-AQ3E7B9 74 aa3.14□□□□□ -1.91
PRP9YDL030W CYR1P08678 2026 aaKnown RBP3.14□□□□□ -1.91
PRP9YDL030W YSY6P38374 65 aa3.13□□□□□ -1.91
PRP9YDL030W YNL046WP53956 172 aa3.13□□□□□ -1.91
PRP9YDL030W YDR209CQ03480 137 aa3.13□□□□□ -1.91
PRP9YDL030W VTC1P40046 129 aaRIP-Chip data3.12□□□□□ -1.91not detected
PRP9YDL030W YER187WP40102 141 aa3.12□□□□□ -1.91
PRP9YDL030W YDR115WQ04598 105 aa3.12□□□□□ -1.91
PRP9YDL030W IRC23Q08416 157 aa3.12□□□□□ -1.91
PRP9YDL030W YIL046W-AQ3E7Z4 54 aa3.12□□□□□ -1.91
PRP9YDL030W RPL16AP26784 199 aaKnown RBP3.12□□□□□ -1.91
PRP9YDL030W RPL16BP26785 198 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 234.5 ms