RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 SNX17Q15036 470 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 SBK1Q52WX2 424 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 TMEM63BQ5T3F8 832 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 LMBRD2Q68DH5 695 aaPredicted RBP11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ZNF554Q86TJ5 538 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 APOPT1Q96IL0 206 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 FBXO40Q9UH90 709 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 PBRM1Q86U86 1689 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CLOCKO15516 846 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 KRT6BP04259 564 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 KRT6CP48668 564 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 WASHC5Q12768 1159 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 GTF2H3Q13889 308 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 NFYCQ13952 458 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 C9orf16Q9BUW7 83 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CACNA2D2Q9NY47 1150 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 TBC1D12O60347 775 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 PRKAA2P54646 552 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 TFDP3Q5H9I0 405 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ATG4AQ8WYN0 398 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ASIC4Q96FT7 647 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 THUMPD3Q9BV44 507 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 GRIP2Q9C0E4 1043 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 RMND5AQ9H871 391 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 TAF4O00268 1085 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 HLA-DRAP01903 254 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CCDC130P13994 396 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 NCF4Q15080 339 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 FUT11Q495W5 492 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ZNF618Q5T7W0 954 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CACHD1Q5VU97 1274 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 BTBD8Q5XKL5 378 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 EXD1Q8NHP7 514 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 PRG3Q9Y2Y8 225 aaPredicted RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ADCY10Q96PN6 1610 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 E9PBE3 544 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 DGAT1O75907 488 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 CPA3P15088 417 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ACADSBP45954 432 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 RPL5P46777 297 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 NR1H2P55055 460 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 BOLA3Q53S33 107 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ZNF341Q9BYN7 854 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 REXO4Q9GZR2 422 aaKnown RBP11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 SHOC2Q9UQ13 582 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 ERBB3P21860 1342 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 METP08581 1390 aa11.7□□□□□ -0.54
SMARCA2-258ENST00000637103 KRT87PA6NCN2 255 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SDR42E2A6NKP2 422 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SNX3O60493 162 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 PSMB9P28065 219 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 FAM9CQ8IZT9 166 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SETD9Q8NE22 299 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 GCNAQ96QF7 691 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SIK2Q9H0K1 926 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 TSR3Q9UJK0 312 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SORCS3Q9UPU3 1222 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 CDC42BPGQ6DT37 1551 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 H0YC42 278 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SERPINE1P05121 402 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 ATP6V1B2P21281 511 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 RGS4P49798 205 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SERPINH1P50454 418 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 WDR72Q3MJ13 1102 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 DHFR2Q86XF0 187 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 FNIP1Q8TF40 1166 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 CKAP2Q8WWK9 683 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 ZNF333Q96JL9 665 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 DEPDC7Q96QD5 511 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 KCTD14Q9BQ13 255 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 RRN3Q9NYV6 651 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 IPPQ9Y573 584 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 SYNDIG1LA6NDD5 238 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 BNIP3LO60238 219 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 PSMC6P62333 389 aa11.69□□□□□ -0.54
SMARCA2-258ENST00000637103 RBP5P82980 135 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms