RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 KIF5BP33176 963 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 ABCD1P33897 745 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 AARSP49588 968 aaKnown RBP eCLIP5.44□□□□□ -1.541e-12■■■□□ 14.6
TSR1-203ENST00000575049 MRE11P49959 708 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 RRADP55042 308 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 CDC42EP1Q00587 391 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 CALD1Q05682 793 aaKnown RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 FSTL1Q12841 308 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 NAIPQ13075 1403 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 ACVR2BQ13705 512 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 NOLC1Q14978 699 aaKnown RBP eCLIP5.44□□□□□ -1.549e-81■■■■■ 105.7
TSR1-203ENST00000575049 CTXN3Q4LDR2 81 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 FMN1Q68DA7 1419 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 USP49Q70CQ1 688 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 UNC13DQ70J99 1090 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 LARP4Q71RC2 724 aaKnown RBP eCLIP5.44□□□□□ -1.54
TSR1-203ENST00000575049 DNAJB7Q7Z6W7 309 aaPredicted RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 UBE2Q1Q7Z7E8 422 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 PPP1R3BQ86XI6 285 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 VGLL2Q8N8G2 317 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 NAT8LQ8N9F0 302 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 AVL9Q8NBF6 648 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 GOT1L1Q8NHS2 421 aaPredicted RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 SCAMP5Q8TAC9 235 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 SDCCAG3Q96C92 435 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 PRPF18Q99633 342 aaKnown RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 OSBPL6Q9BZF3 934 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 DPH1Q9BZG8 443 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 OR10A4Q9H209 315 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 TAF1DQ9H5J8 278 aaPredicted RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 EPS8L2Q9H6S3 715 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 SMURF2Q9HAU4 748 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
TSR1-203ENST00000575049 TDP1Q9NUW8 608 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 MTRRQ9UBK8 725 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 SEL1LQ9UBV2 794 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 PTPN23Q9H3S7 1636 aa5.44□□□□□ -1.54
TSR1-203ENST00000575049 EFCAB5A4FU69 1503 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 AKNAQ7Z591 1439 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 FAM171A2A8MVW0 826 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 RTCAO00442 366 aaKnown RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 FCHO1O14526 889 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 AP3D1O14617 1153 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 GJB3O75712 270 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ACTL6BO94805 426 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PGM3O95394 542 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TGDSO95455 350 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PLATP00750 562 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PRKCBP05771 671 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ACADMP11310 421 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 SYN1P17600 705 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 MALP21145 153 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TGM1P22735 817 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 CCT4P50991 539 aaKnown RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 STAT5BP51692 787 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PPP2CBP62714 309 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PPP2CAP67775 309 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 CREB5Q02930 508 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TARDBPQ13148 414 aaKnown RBP eCLIP5.43□□□□□ -1.546e-7■■■■□ 21.8
TSR1-203ENST00000575049 MAN2A1Q16706 1144 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TTC31Q49AM3 519 aaPredicted RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 ZMAT1Q5H9K5 638 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 CCDC158Q5M9N0 1113 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ARL6IP4Q66PJ3 421 aaKnown RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 KAZNQ674X7 775 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TRIM68Q6AZZ1 485 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ARHGEF18Q6ZSZ5 1173 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 GAREM2Q75VX8 874 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 LCA5Q86VQ0 697 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 MICU3Q86XE3 530 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 GATAD2AQ86YP4 633 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ERC1Q8IUD2 1116 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 RPAP2Q8IXW5 612 aaPredicted RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 BCL6BQ8N143 479 aaPredicted RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 TOR1AIP2Q8NFQ8 470 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.43□□□□□ -1.54
TSR1-203ENST00000575049 CSGALNACT1Q8TDX6 532 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ZNF384Q8TF68 577 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ZFPM2Q8WW38 1151 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 GAB3Q8WWW8 586 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 RNF125Q96EQ8 232 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 PPP1R9BQ96SB3 815 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 BDH2Q9BUT1 245 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 MAGEB5Q9BZ81 275 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TWSG1Q9GZX9 223 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 ABCG4Q9H172 646 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 XAB2Q9HCS7 855 aaKnown RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 PRDM8Q9NQV8 689 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 EIF2B3Q9NR50 452 aaKnown RBP5.43□□□□□ -1.54
TSR1-203ENST00000575049 TBC1D23Q9NUY8 699 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 KCMF1Q9P0J7 381 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 MAFFQ9ULX9 164 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 TBX20Q9UMR3 447 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 NUDCQ9Y266 331 aa5.43□□□□□ -1.54
TSR1-203ENST00000575049 HS3ST4Q9Y661 456 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms