RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CLCN4P51793 760 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CDR1P51861 262 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 EPHB3P54753 998 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 NOMO3P69849 1222 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 KRT83P78385 493 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 GFPT1Q06210 699 aaPredicted RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 DUSP6Q16828 381 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PPM1LQ5SGD2 360 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 ALKBH5Q6P6C2 394 aaKnown RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 LILRA6Q6PI73 481 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 DENND5BQ6ZUT9 1274 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 ITIH5Q86UX2 942 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PIGZQ86VD9 579 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 NUP93Q8N1F7 819 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 SIX6OS1Q8N1H7 587 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 SLC35F5Q8WV83 523 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CPA5Q8WXQ8 436 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 KCTD13Q8WZ19 329 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CASP10Q92851 521 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 LRCH3Q96II8 777 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 KCNK16Q96T55 309 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PCDHB18PQ96TA0 734 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 EIF3CQ99613 913 aaKnown RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 SMOQ99835 787 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 SYT11Q9BT88 431 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 TTYH1Q9H313 450 aaPredicted RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 IGFLR1Q9H665 355 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CSNK1G1Q9HCP0 422 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PNPLA8Q9NP80 782 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CYLDQ9NQC7 956 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 COMMD8Q9NX08 183 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 ADAM22Q9P0K1 906 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 FBXW11Q9UKB1 542 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 STRIP2Q9ULQ0 834 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 TRIP11Q15643 1979 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 A0A087X0T9 212 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 BEST1O76090 585 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 FBXO21O94952 628 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 RTN3O95197 1032 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 NDUFA10O95299 355 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SEC24AO95486 1093 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 FTLP02792 175 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 H2AFZP0C0S5 128 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SPATA31D3P0C874 917 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 FAM228BP0C875 321 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 CSH1P0DML2 217 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 CSH2P0DML3 217 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 MYBL1P10243 752 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 LCP1P13796 627 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 CENPCQ03188 943 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 TWF1Q12792 350 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 PDCLQ13371 301 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 DDR2Q16832 855 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 ASTE1Q2TB18 679 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 TCEAL5Q5H9L2 206 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 HABP4Q5JVS0 413 aaKnown RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 PMF1Q6P1K2 205 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SPATA31D4Q6ZUB0 917 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 H2AFVQ71UI9 128 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 ADGRD2Q7Z7M1 963 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 KIAA1328Q86T90 577 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 PHF13Q86YI8 300 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 ZDHHC17Q8IUH5 632 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 WDTC1Q8N5D0 677 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SLC30A5Q8TAD4 765 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SLC7A14Q8TBB6 771 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 GIPC2Q8TF65 315 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SLC22A17Q8WUG5 538 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 C18orf8Q96DM3 657 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 VCPIP1Q96JH7 1222 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SPATA17Q96L03 361 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 ZNF512Q96ME7 567 aaPredicted RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 FAM161BQ96MY7 647 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 RHOBTB2Q9BYZ6 727 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 ISCUQ9H1K1 167 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 CRISPLD1Q9H336 500 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 FBXO44Q9H4M3 255 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 CNGB3Q9NQW8 809 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 MAN1C1Q9NR34 630 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 SPTLC3Q9NUV7 552 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 DZANK1Q9NVP4 752 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 WDR35Q9P2L0 1181 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 YIPF1Q9Y548 306 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 ASB3Q9Y575 518 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 INSL5Q9Y5Q6 135 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 HCFC2Q9Y5Z7 792 aa8.21□□□□□ -1.1
CDH1-208ENST00000565810 PDCD11Q14690 1871 aaKnown RBP8.21□□□□□ -1.1
CDH1-208ENST00000565810 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 ANKRD62A6NC57 917 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 E5RJQ4 531 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TULP2O00295 520 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 XYLBO75191 536 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms