RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.15□□□□□ -1.27
LINC02249-202ENST00000562624 PPP2R3CQ969Q6 453 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 TSNARE1Q96NA8 513 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 CATSPER2Q96P56 530 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 FAM129AQ9BZQ8 928 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 CDT1Q9H211 546 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 SNX24Q9Y343 169 aa7.15□□□□□ -1.27
LINC02249-202ENST00000562624 MUTP22033 750 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ANXA13P27216 316 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 GRIK1P39086 918 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 RGS7P49802 495 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 PSMC1P62191 440 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 XRCC4Q13426 336 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 LRRC14Q15048 493 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 DCAF4L1Q3SXM0 396 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ZNF697Q5TEC3 545 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 SH3RF1Q7Z6J0 888 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 FIBCD1Q8N539 461 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 MAB21L3Q8N8X9 362 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 AGAP11Q8TF27 550 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TRIM55Q9BYV6 548 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TRAF3IP3Q9Y228 551 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TTLL3Q9Y4R7 772 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 DDX60LQ5H9U9 1706 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 NID2Q14112 1375 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TIAM2Q8IVF5 1701 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 O00370 1275 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 UBOX5O94941 541 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 FGGP02679 453 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 FESP07332 822 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 CA4P22748 312 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 RAP1GAPP47736 663 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 CDH8P55286 799 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 MYL6P60660 151 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ADCY1Q08828 1119 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 PPIGQ13427 754 aaKnown RBP eCLIP7.14□□□□□ -1.274e-6■■□□□ 14.5
LINC02249-202ENST00000562624 RIPK1Q13546 671 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ANKRD20A4Q4UJ75 823 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 LIN9Q5TKA1 542 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 JADE1Q6IE81 842 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 BHMTQ93088 406 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ZNF560Q96MR9 790 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 SH3GL2Q99962 352 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 AGO3Q9H9G7 860 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 SLC38A7Q9NVC3 462 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 UBQLN1Q9UMX0 589 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 IPPQ9Y573 584 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 MCM3APO60318 1980 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 LGR5O75473 907 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ZNF189O75820 626 aaPredicted RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 PDE5AO76074 875 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 RTN3O95197 1032 aaPredicted RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ECEL1O95672 775 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 URODP06132 367 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 NSFP46459 744 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 CACNA2D1P54289 1103 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TPD52P55327 224 aaPredicted RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 NOP14P78316 857 aaKnown RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 PTK7Q13308 1070 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TMED2Q15363 201 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 CDO1Q16878 200 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 OR6B2Q6IFH4 312 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 SLC24A5Q71RS6 500 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 RASSF3Q86WH2 238 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 SIX6OS1Q8N1H7 587 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TAS1R2Q8TE23 839 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 C18orf25Q96B23 403 aaPredicted RBP7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TTC1Q99614 292 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 EDEM3Q9BZQ6 932 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 RNF39Q9H2S5 420 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 OLFML3Q9NRN5 406 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TBK1Q9UHD2 729 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 ADAMTS1Q9UHI8 967 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 Q9Y3F1 56 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 TCHHQ07283 1943 aa7.14□□□□□ -1.27
LINC02249-202ENST00000562624 PPP1R3GB7ZBB8 358 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 POC1B-GALNT4F8VUJ3 575 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 CYB561D2O14569 222 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 CCDC22O60826 627 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 ZNF18P17022 549 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 GJA8P48165 433 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 TAF6P49848 677 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 KLK7P49862 253 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 GATMP50440 423 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 CTXN3Q4LDR2 81 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 ZCWPW2Q504Y3 356 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 CHRDL2Q6WN34 429 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 NIFKQ9BYG3 293 aaKnown RBP7.13□□□□□ -1.27
LINC02249-202ENST00000562624 TRPC7Q9HCX4 862 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 RAB20Q9NX57 234 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 ZNF148Q9UQR1 794 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 MCF2LO15068 1137 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 EIF3DO15371 548 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC02249-202ENST00000562624 RAD51CO43502 376 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 NFICP08651 508 aa7.13□□□□□ -1.27
LINC02249-202ENST00000562624 UBTFL6P0CB48 400 aaPredicted RBP7.13□□□□□ -1.27
LINC02249-202ENST00000562624 KLRC2P26717 231 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms