RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RAB11FIP4Q86YS3 637 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 FMNL3Q8IVF7 1028 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 DEFB119Q8N690 84 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 FRMD1Q8N878 549 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 TTC16Q8NEE8 873 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 NCOA7Q8NI08 942 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 CCDC26Q8TAB7 109 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 IGDCC4Q8TDY8 1250 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 CEP170P1Q96L14 293 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 TEKT3Q9BXF9 490 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 SEMA4CQ9C0C4 833 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 ATXN3LQ9H3M9 355 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 PRDM16Q9HAZ2 1276 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 HPS4Q9NQG7 708 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 KCNK4Q9NYG8 393 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 BCCIPQ9P287 314 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC1-213ENST00000561359 IL17BQ9UHF5 180 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 SRPK3Q9UPE1 567 aa5.83□□□□□ -1.48
HERC1-213ENST00000561359 VWA8A3KMH1 1905 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TDRD15B5MCY1 1934 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 PDCD11Q14690 1871 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 ENO4A6NNW6 628 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 H7C4K7 107 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TMEM189-UBE2V1I3L0A0 370 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 PLK4O00444 970 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 ZBTB39O15060 712 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TBX3O15119 743 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 MSH4O15457 936 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 B4GALT5O43286 388 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 AP5Z1O43299 807 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 CBFA2T3O75081 653 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 GJB3O75712 270 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 RECQL4O94761 1208 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 ATXN1LP0C7T5 689 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 ARSAP15289 507 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 PCSK2P16519 638 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 SOX18P35713 384 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 SCNN1AP37088 669 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 BRCC3P46736 316 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 CLCNKBP51801 687 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 EPHB3P54753 998 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 NRG1Q02297 640 aaPredicted RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 RPL6Q02878 288 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 CYP4A11Q02928 519 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TFDP1Q14186 410 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 LY6DQ14210 128 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 PLEKHG6Q3KR16 790 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 CTXN3Q4LDR2 81 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 PEAR1Q5VY43 1037 aaPredicted RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 CC2D1AQ6P1N0 951 aaPredicted RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 CASC1Q6TDU7 716 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 SHISA2Q6UWI4 295 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TMTC3Q6ZXV5 915 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 GAREM2Q75VX8 874 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 FERMT3Q86UX7 667 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 FMR1NBQ8N0W7 255 aaPredicted RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 CCDC33Q8N5R6 958 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 RDM1Q8NG50 284 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 OLIG1Q8TAK6 271 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TCP11Q8WWU5 503 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 CRYGNQ8WXF5 182 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TTC9Q92623 222 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 CD101Q93033 1021 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 GJA10Q969M2 543 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 NXPE2Q96DL1 559 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 TBC1D32Q96NH3 1257 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 RIT2Q99578 217 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 FAM83CQ9BQN1 747 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 POLR3CQ9BUI4 534 aaPredicted RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 TRIM4Q9C037 500 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 DHX33Q9H6R0 707 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 AFF4Q9UHB7 1163 aaKnown RBP5.82□□□□□ -1.48
HERC1-213ENST00000561359 FBXL5Q9UKA1 691 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 PCOLCE2Q9UKZ9 415 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 YIPF1Q9Y548 306 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 C2CD3Q4AC94 2353 aa5.82□□□□□ -1.48
HERC1-213ENST00000561359 ITPR3Q14573 2671 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 E7EWF7 191 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 E9PAM4 449 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 HIP1O00291 1037 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 TLX3O43711 291 aaPredicted RBP5.81□□□□□ -1.48
HERC1-213ENST00000561359 FGF19O95750 216 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 CYP21A2P08686 494 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 GP1BBP13224 206 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 GABRR2P28476 465 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 GJA4P35212 333 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ALDH1A3P47895 512 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ANTXR2P58335 489 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 PSMC5P62195 406 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 RHDQ02161 417 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 MBTD1Q05BQ5 628 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ZNF33AQ06730 810 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 HYAL2Q12891 473 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 PLD1Q13393 1074 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 AAMPQ13685 434 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 MXD4Q14582 209 aaPredicted RBP5.81□□□□□ -1.48
HERC1-213ENST00000561359 EMC2Q15006 297 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 NAB2Q15742 525 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms