RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 KBTBD6Q86V97 674 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 NETO1Q8TDF5 533 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 SH3RF2Q8TEC5 729 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 SCFD1Q8WVM8 642 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 ELMO3Q96BJ8 720 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 PCED1BQ96HM7 432 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 ZNF396Q96N95 335 aaPredicted RBP14.2□□□□□ -0.14
TGFB3-204ENST00000556285 HHIPQ96QV1 700 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 P2RY13Q9BPV8 354 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CUEDC2Q9H467 287 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 DPEP3Q9H4B8 488 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CFAP47Q6ZTR5 3102 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 USP24Q9UPU5 2620 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 SCAMP3O14828 347 aaKnown RBP14.19□□□□□ -0.14
TGFB3-204ENST00000556285 POLR2DO15514 142 aaKnown RBP14.19□□□□□ -0.14
TGFB3-204ENST00000556285 YEATS4O95619 227 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 HDCP19113 662 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 TNNI1P19237 187 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 GNL1P36915 607 aaPredicted RBP14.19□□□□□ -0.14
TGFB3-204ENST00000556285 PSMD6Q15008 389 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 C4orf50Q6ZRC1 276 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 GRAMD1CQ8IYS0 662 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 CPA6Q8N4T0 437 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 IQUBQ8NA54 791 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 PLEKHO2Q8TD55 490 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 SPATA17Q96L03 361 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 CGRRF1Q99675 332 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 RNF38Q9H0F5 515 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 SLC39A2Q9NP94 309 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 SLC8A2Q9UPR5 921 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 R3HCC1Q9Y3T6 440 aaKnown RBP14.19□□□□□ -0.14
TGFB3-204ENST00000556285 CEP192Q8TEP8 1941 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 CHD8Q9HCK8 2581 aa14.19□□□□□ -0.14
TGFB3-204ENST00000556285 ADAMTS9Q9P2N4 1935 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 F8VP50 259 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 TM4SF5O14894 197 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 LRP3O75074 770 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 RPP40O75818 363 aaKnown RBP14.18□□□□□ -0.14
TGFB3-204ENST00000556285 SDHBP21912 280 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 AFMP43652 599 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 IFNAR2P48551 515 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 CASP4P49662 377 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 MYL6P60660 151 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 AMPD3Q01432 767 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 CUL4BQ13620 913 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 PKP1Q13835 747 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 KCNB1Q14721 858 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 GAB4Q2WGN9 574 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 TCEAL6Q6IPX3 200 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 VSTM1Q6UX27 236 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 OR6B3Q8NGW1 331 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 RPLP0P6Q8NHW5 317 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 MYCBPAPQ8TBZ2 947 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 GAB3Q8WWW8 586 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 CD101Q93033 1021 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 TCEAL3Q969E4 200 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 ZNF518BQ9C0D4 1074 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 XYLT2Q9H1B5 865 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 KIAA1586Q9HCI6 787 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 ARHGAP26Q9UNA1 814 aa14.18□□□□□ -0.14
TGFB3-204ENST00000556285 CNOT1A5YKK6 2376 aaKnown RBP14.18□□□□□ -0.14
TGFB3-204ENST00000556285 LEFTY2O00292 366 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 CLDN5O00501 218 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 DCLK1O15075 740 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 ATG13O75143 517 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 PTPN1P18031 435 aaKnown RBP14.17□□□□□ -0.14
TGFB3-204ENST00000556285 DRD1P21728 446 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 OPRD1P41143 372 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 RAP1GAPP47736 663 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 MAPRE1Q15691 268 aaKnown RBP14.17□□□□□ -0.14
TGFB3-204ENST00000556285 WDR72Q3MJ13 1102 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 DENND5BQ6ZUT9 1274 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 HS2ST1Q7LGA3 356 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 SFTPA1Q8IWL2 248 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 FSIP1Q8NA03 581 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 XXYLT1Q8NBI6 393 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 ATP2A3Q93084 1043 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 FNBP1Q96RU3 617 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 TTLL2Q9BWV7 592 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 SMPD4Q9NXE4 827 aa14.17□□□□□ -0.14
TGFB3-204ENST00000556285 NXF1Q9UBU9 619 aaKnown RBP14.17□□□□□ -0.14
TGFB3-204ENST00000556285 WDFY3Q8IZQ1 3526 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 ZNF840PA6NDX5 716 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 TACC1O75410 805 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 EPN2O95208 641 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 CCDC192P0DO97 292 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 ZSCAN22P10073 491 aaPredicted RBP14.16□□□□□ -0.14
TGFB3-204ENST00000556285 TCF3P15923 654 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 ANXA13P27216 316 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 CDH8P55286 799 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 AMPD2Q01433 879 aa14.16□□□□□ -0.14
TGFB3-204ENST00000556285 MESP2Q0VG99 397 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms