RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 CARSP49589 748 aaKnown RBP9.33□□□□□ -0.92
KLHL3-209ENST00000508657 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 IYDQ6PHW0 289 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 DHX40Q8IX18 779 aaKnown RBP9.33□□□□□ -0.92
KLHL3-209ENST00000508657 LINC00301Q8NCQ3 95 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 PITPNM3Q9BZ71 974 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 ZNF304Q9HCX3 659 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 C1orf146Q5VVC0 180 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 HDDC3Q8N4P3 179 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 CNPPD1Q9BV87 410 aa9.33□□□□□ -0.92
KLHL3-209ENST00000508657 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
KLHL3-209ENST00000508657 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.33□□□□□ -0.92
KLHL3-209ENST00000508657 STRNO43815 780 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 USP11P51784 963 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 LMBRD1Q9NUN5 540 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 TCOF1Q13428 1488 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 LRRIQ3A6PVS8 624 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 VPS26AO75436 327 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 NDUFA10O95299 355 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PEX5P50542 639 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 RARS2Q5T160 578 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 IQSEC1Q6DN90 963 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PSRC1Q6PGN9 363 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 AGPAT1Q99943 283 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 EXOSC4Q9NPD3 245 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ASAH2Q9NR71 780 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 COQ6Q9Y2Z9 468 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 INSRRP14616 1297 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ALAS2P22557 587 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ACADSBP45954 432 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ERVK-9P63128 1117 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ERVK-24P63145 666 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ZBED6P86452 979 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 VGLL4Q14135 290 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 SPARCL1Q14515 664 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 COLEC12Q5KU26 742 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CENPPQ6IPU0 288 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 HHIPL2Q6UWX4 724 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 USP50Q70EL3 339 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 DEPDC7Q96QD5 511 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 NDEL1Q9GZM8 345 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CYP4F12Q9HCS2 524 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 TXLNGQ9NUQ3 528 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CLDND1Q9NY35 253 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CEP72Q9P209 647 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PRMT3O60678 531 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PYGBP11216 843 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ZNF24P17028 368 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 POU1F1P28069 291 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 EFHC1Q5JVL4 640 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 SDHAF4Q5VUM1 108 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 GPC2Q8N158 579 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CXorf40BQ96DE9 158 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 HIPK3Q9H422 1215 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PRR23D1E9PI22 279 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PRR23D2P0DMB1 279 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ENO3P13929 434 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 DHPSP49366 369 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CLPBQ9H078 707 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 WDR41Q9HAD4 459 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 OGFRQ9NZT2 677 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PBRM1Q86U86 1689 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 NFIBO00712 420 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 FGBP02675 491 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 TRIM60Q495X7 471 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PTAR1Q7Z6K3 402 aaPredicted RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 ATP6V1C2Q8NEY4 427 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 REXO5Q96IC2 774 aaKnown RBP9.32□□□□□ -0.92
KLHL3-209ENST00000508657 KCNS3Q9BQ31 491 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 CHMP2BQ9UQN3 213 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
KLHL3-209ENST00000508657 IQCMA0A1B0GVH7 501 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 PDHBP11177 359 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 OR1E1P30953 314 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 PNPLA4P41247 253 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 CCINQ13939 588 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 KLHL38Q2WGJ6 581 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 POMZP3Q6PJE2 187 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 CLEC4FQ8N1N0 589 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 SCAIQ8N9R8 606 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 SETD7Q8WTS6 366 aaKnown RBP9.31□□□□□ -0.92
KLHL3-209ENST00000508657 SIRPGQ9P1W8 387 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 KANSL3Q9P2N6 904 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 TRAV19A0A0A6YYK7 116 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 GYG2O15488 501 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 CYP2F1P24903 491 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 FOXO4P98177 505 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 TTLL9Q3SXZ7 439 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 CBWD3Q5JTY5 395 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 CBWD5Q5RIA9 395 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
KLHL3-209ENST00000508657 C1QTNF7Q9BXJ2 289 aa9.31□□□□□ -0.92
KLHL3-209ENST00000508657 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms