RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 PCK1P35558 622 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 ACADSBP45954 432 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 GRIK3Q13003 919 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 CCNG2Q16589 344 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 TFDP3Q5H9I0 405 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 SYDE1Q6ZW31 735 aaPredicted RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 RXFP2Q8WXD0 754 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 ATG4AQ8WYN0 398 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 CACNG4Q9UBN1 327 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 PCNTO95613 3336 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 hCG_1818297A0A087WSY0 165 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 CASTOR2A6NHX0 329 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 DPYSL4O14531 572 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 PDGFRAP16234 1089 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 LHX1P48742 406 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 KRT17Q04695 432 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 KAZNQ674X7 775 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 RAPGEF5Q92565 580 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 ACSF2Q96CM8 615 aaPredicted RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 PIWIL1Q96J94 861 aaKnown RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 HNRNPABQ99729 332 aaKnown RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 PHF24Q9UPV7 400 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 R3HDM2Q9Y2K5 976 aaKnown RBP16.6■□□□□ 0.25
RPN1-207ENST00000497289 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
RPN1-207ENST00000497289 PAPSS1O43252 624 aaPredicted RBP16.59■□□□□ 0.25
RPN1-207ENST00000497289 GAS8O95995 478 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 PTPN1P18031 435 aaKnown RBP16.59■□□□□ 0.25
RPN1-207ENST00000497289 MIPP30301 263 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 SCNN1AP37088 669 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 CDKN2BP42772 138 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 RPL34P49207 117 aaKnown RBP16.59■□□□□ 0.25
RPN1-207ENST00000497289 SLC8A3P57103 927 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 FAM193AP78312 1265 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 UPP1Q16831 310 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 KCTD19Q17RG1 926 aaPredicted RBP16.59■□□□□ 0.25
RPN1-207ENST00000497289 ECHDC2Q86YB7 292 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 ATL2Q8NHH9 583 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 HSFY1Q96LI6 401 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 FMO2Q99518 471 aa16.59■□□□□ 0.25
RPN1-207ENST00000497289 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPN1-207ENST00000497289 DDX43Q9NXZ2 648 aaKnown RBP16.59■□□□□ 0.25
RPN1-207ENST00000497289 ARVCFO00192 962 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 XPO1O14980 1071 aaKnown RBP16.58■□□□□ 0.25
RPN1-207ENST00000497289 TRUB2O95900 331 aaKnown RBP16.58■□□□□ 0.25
RPN1-207ENST00000497289 POMCP01189 267 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 KRT10P13645 584 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 ACAT1P24752 427 aaKnown RBP16.58■□□□□ 0.25
RPN1-207ENST00000497289 IL1R2P27930 398 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 TKTP29401 623 aaKnown RBP16.58■□□□□ 0.25
RPN1-207ENST00000497289 FLT3P36888 993 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 GGCXP38435 758 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 RPL21P46778 160 aaKnown RBP16.58■□□□□ 0.25
RPN1-207ENST00000497289 SMTNL2Q2TAL5 461 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 CFAP58Q5T655 872 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 TRNP1Q6NT89 227 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 C3orf58Q8NDZ4 430 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 UROC1Q96N76 676 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 FAM129AQ9BZQ8 928 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 USP18Q9UMW8 372 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 EFR3BQ9Y2G0 817 aa16.58■□□□□ 0.25
RPN1-207ENST00000497289 GRAP2O75791 330 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 PAX3P23760 479 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 SDC4P31431 198 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 PTK6Q13882 451 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 SCUBE3Q8IX30 993 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 NCAPGQ9BPX3 1015 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 DUSP16Q9BY84 665 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 RGS18Q9NS28 235 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 ZDHHC18Q9NUE0 388 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 GRHL1Q9NZI5 618 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 PCSK1NQ9UHG2 260 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 INPP5FQ9Y2H2 1132 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
RPN1-207ENST00000497289 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
RPN1-207ENST00000497289 AGPSO00116 658 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 POLR3GO15318 223 aaPredicted RBP16.57■□□□□ 0.24
RPN1-207ENST00000497289 ATP2C2O75185 946 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 GABBR2O75899 941 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 SYF2O95926 243 aaKnown RBP16.57■□□□□ 0.24
RPN1-207ENST00000497289 ODC1P11926 461 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 LCP1P13796 627 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 KDELR1P24390 212 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
RPN1-207ENST00000497289 LMNB2Q03252 620 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 TUSC3Q13454 348 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 KCNT1Q5JUK3 1230 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
RPN1-207ENST00000497289 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
RPN1-207ENST00000497289 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms