RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 MVB12AQ96EY5 273 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CHAMP1Q96JM3 812 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 AK8Q96MA6 479 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 DACH2Q96NX9 599 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 NOX5Q96PH1 765 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ATP6V0BQ99437 205 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 SPXQ9BT56 116 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 EMILIN2Q9BXX0 1053 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ADAM19Q9H013 955 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 PAIP1Q9H074 479 aaKnown RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 BRD8Q9H0E9 1235 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 SEMA4AQ9H3S1 761 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ANTXR1Q9H6X2 564 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CNTD2Q9H8S5 307 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 INCENPQ9NQS7 918 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 EIF2B3Q9NR50 452 aaKnown RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
SF1-217ENST00000486960 AATFQ9NY61 560 aaKnown RBP eCLIP5.87□□□□□ -1.47
SF1-217ENST00000486960 TAS2R3Q9NYW6 316 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 AKAP7Q9P0M2 348 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 ACTR3BQ9P1U1 418 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 TEKT2Q9UIF3 430 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 PCOLCE2Q9UKZ9 415 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 EXOC7Q9UPT5 735 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CLCA2Q9UQC9 943 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 PCDHB5Q9Y5E4 795 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 USP16Q9Y5T5 823 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ATP23Q9Y6H3 246 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 FANCMQ8IYD8 2048 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ARHGAP10A1A4S6 786 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 POM121BA6NF01 834 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 TMEM221A6NGB7 291 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 L7N2F9 121 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 M0R296 226 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CBX4O00257 560 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 TAF4O00268 1085 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 EBAG9O00559 213 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CDK2AP1O14519 115 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ENC1O14682 589 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 TNPO2O14787 897 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 KCNQ3O43525 872 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 SYNCRIPO60506 623 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 FOXD2O60548 495 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ERAL1O75616 437 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 PIAS2O75928 621 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ITGB1P05556 798 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ACADMP11310 421 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CETPP11597 493 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 COL6A2P12110 1019 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 IFNAR1P17181 557 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 S100A5P33763 92 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 RFC1P35251 1148 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 KRT2P35908 639 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 HSPA7P48741 367 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 KPNA1P52294 538 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ADKP55263 362 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 RIPK4P57078 832 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ERVK-9P63128 1117 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 BEX3Q00994 111 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ZP2Q05996 745 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ACTN3Q08043 901 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ZNF543Q08ER8 600 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CETN1Q12798 172 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 SNX1Q13596 522 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CUL2Q13617 745 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 NEDD9Q14511 834 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 DLGAP5Q15398 846 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 SURF1Q15526 300 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ZYXQ15942 572 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 CLPPQ16740 277 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ANO6Q4KMQ2 910 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CCDC178Q5BJE1 867 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 XKR9Q5GH70 373 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 TOR1AIP1Q5JTV8 583 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ATPAF1Q5TC12 328 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 AADACL4Q5VUY2 407 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 METTL11BQ5VVY1 283 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 DCLRE1AQ6PJP8 1040 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 C15orf52Q6ZUT6 534 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 ATG9AQ7Z3C6 839 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 MTDHQ86UE4 582 aaKnown RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 TSPYL5Q86VY4 417 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 SPATA24Q86W54 205 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 BPHLQ86WA6 291 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 PDCL2Q8N4E4 241 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 FAM184AQ8NB25 1140 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 GMCL1P1Q8NEA9 526 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.473e-7■□□□□ 8
SF1-217ENST00000486960 FAM76AQ8TAV0 307 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 GRK7Q8WTQ7 553 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 RNF139Q8WU17 664 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 CHTF18Q8WVB6 975 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 KLHL6Q8WZ60 621 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 SLC5A5Q92911 643 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 PTPRN2Q92932 1015 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 ACSF2Q96CM8 615 aaPredicted RBP5.86□□□□□ -1.47
SF1-217ENST00000486960 CALML4Q96GE6 196 aa5.86□□□□□ -1.47
SF1-217ENST00000486960 VPS50Q96JG6 964 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms