RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 KCNJ1P48048 391 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 COPS2P61201 443 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 SPOCD1Q6ZMY3 1216 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 RXFP2Q8WXD0 754 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 CNPY3Q9BT09 278 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 UNC93B1Q9H1C4 597 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 CHST7Q9NS84 486 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 LRRD1A4D1F6 860 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 PAPSS1O43252 624 aaPredicted RBP17.56■□□□□ 0.4
CTSA-207ENST00000484855 PDGFRAP16234 1089 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 LHX1P48742 406 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 SMTNL2Q2TAL5 461 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 KAZNQ674X7 775 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 DUPD1Q68J44 220 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 HNRNPABQ99729 332 aaKnown RBP17.56■□□□□ 0.4
CTSA-207ENST00000484855 UBXN6Q9BZV1 441 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 CYLDQ9NQC7 956 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 R3HDM2Q9Y2K5 976 aaKnown RBP17.56■□□□□ 0.4
CTSA-207ENST00000484855 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 DNM1LO00429 736 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 ECEL1O95672 775 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 IL1R2P27930 398 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 FLT3P36888 993 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 ACADSBP45954 432 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 TUSC3Q13454 348 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 SNX1Q13596 522 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 CCDC142Q17RM4 750 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 TRNP1Q6NT89 227 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 SCUBE3Q8IX30 993 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 NEUROG2Q9H2A3 272 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 HOMER3Q9NSC5 361 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
CTSA-207ENST00000484855 GABBR2O75899 941 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 KRT10P13645 584 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 LCP1P13796 627 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 MIPP30301 263 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 PTPN7P35236 360 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTSA-207ENST00000484855 SLC8A3P57103 927 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 TFDP3Q5H9I0 405 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 MDH1BQ5I0G3 518 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 LRRC8DQ7L1W4 858 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 FUKQ8N0W3 1084 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 SLCO2A1Q92959 643 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 SYT15Q9BQS2 421 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 MED10Q9BTT4 135 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 B3GNT5Q9BYG0 378 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 PCSK1NQ9UHG2 260 aa17.55■□□□□ 0.4
CTSA-207ENST00000484855 C9IYK1 514 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 DPYSL4O14531 572 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 XPO1O14980 1071 aaKnown RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 CAPN15O75808 1086 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 B3GAT3O94766 335 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 TJP3O95049 919 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 ODC1P11926 461 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 OAS2P29728 719 aaKnown RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 PCK1P35558 622 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 RPL34P49207 117 aaKnown RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 TAF5Q15542 800 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 CDO1Q16878 200 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 C15orf59Q2T9L4 293 aaPredicted RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 TIGD5Q53EQ6 642 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 KCNT1Q5JUK3 1230 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 SLC24A5Q71RS6 500 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 RTN4RL1Q86UN2 441 aaPredicted RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
CTSA-207ENST00000484855 GRK7Q8WTQ7 553 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 LINC01599Q8WXQ3 324 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 ZBTB9Q96C00 473 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 HSFY1Q96LI6 401 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 UROC1Q96N76 676 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 DUSP16Q9BY84 665 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 SEZ6LQ9BYH1 1024 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
CTSA-207ENST00000484855 hCG_1818297A0A087WSY0 165 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CLDN5O00501 218 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 SELPP16109 830 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CDKN2BP42772 138 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 PPP1R7Q15435 360 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CCNG2Q16589 344 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 PAN2Q504Q3 1202 aaKnown RBP17.53■□□□□ 0.4
CTSA-207ENST00000484855 KIAA0319Q5VV43 1072 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 MREGQ8N565 214 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CCDC114Q96M63 670 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 SNX24Q9Y343 169 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 H3BQF6 201 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 INPPL1O15357 1258 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 TRUB2O95900 331 aaKnown RBP17.53■□□□□ 0.4
CTSA-207ENST00000484855 EOMESO95936 686 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 NPR3P17342 541 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 DESP17661 470 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 SDC4P31431 198 aa17.53■□□□□ 0.4
CTSA-207ENST00000484855 CDK7P50613 346 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms