RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 DGKEP52429 567 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 SLC39A14Q15043 492 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 GAB4Q2WGN9 574 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 DDX42Q86XP3 938 aaKnown RBP eCLIP14.21□□□□□ -0.13
ABCF1-206ENST00000479542 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 SCN4BQ8IWT1 228 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 CCDC65Q8IXS2 484 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 TSTD1Q8NFU3 115 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 OVCA2Q8WZ82 227 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 OTUB2Q96DC9 234 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 TNMDQ9H2S6 317 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 TRPC7Q9HCX4 862 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 CRTAC1Q9NQ79 661 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 EVLQ9UI08 416 aaPredicted RBP14.21□□□□□ -0.13
ABCF1-206ENST00000479542 LAMA1P25391 3075 aa14.21□□□□□ -0.13
ABCF1-206ENST00000479542 KIAA1549LQ6ZVL6 1849 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 LEFTY2O00292 366 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 KHNYNO15037 678 aaKnown RBP14.2□□□□□ -0.14
ABCF1-206ENST00000479542 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
ABCF1-206ENST00000479542 OAS1P00973 400 aaKnown RBP14.2□□□□□ -0.14
ABCF1-206ENST00000479542 CEACAM1P13688 526 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 IDEP14735 1019 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 LMO2P25791 158 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 CDR1P51861 262 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 ZXDBP98169 803 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 CRY1Q16526 586 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 SNX30Q5VWJ9 437 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 ZNF507Q8TCN5 953 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 EDEM2Q9BV94 578 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 CUEDC2Q9H467 287 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 KBTBD4Q9NVX7 518 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 TBC1D7Q9P0N9 293 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 TBC1D14Q9P2M4 693 aa14.2□□□□□ -0.14
ABCF1-206ENST00000479542 CFAP47Q6ZTR5 3102 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 LNP1A1A4G5 178 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 GOLGA8IPA6NC78 632 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 GOLGA8JA6NMD2 632 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 ATP2C2O75185 946 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 ALDH1A2O94788 518 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 PRPF6O94906 941 aaKnown RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 PROS1P07225 676 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 BDNFP23560 247 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 ANXA13P27216 316 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 HOXD12P35452 270 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 GRIK1P39086 918 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 STAT6P42226 847 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 TNFRSF4P43489 277 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 CREB5Q02930 508 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 RESTQ13127 1097 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 BYSLQ13895 437 aaKnown RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 CCDC6Q16204 474 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 PREPLQ4J6C6 727 aaPredicted RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 NAIF1Q69YI7 327 aaPredicted RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 SCARA3Q6AZY7 606 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 TRAPPC11Q7Z392 1133 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 STKLD1Q8NE28 680 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 OR5B17Q8NGF7 314 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 MYLPFQ96A32 169 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 PCED1BQ96HM7 432 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 CLIC6Q96NY7 704 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 COMMD8Q9NX08 183 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 IL37Q9NZH6 218 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
ABCF1-206ENST00000479542 WASF3Q9UPY6 502 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
ABCF1-206ENST00000479542 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 ABCA7Q8IZY2 2146 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 PTPRDP23468 1912 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 HELZP42694 1942 aaKnown RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 E2F8A0AVK6 867 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 CDX4O14627 284 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 TNFRSF10BO14763 440 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 DCLK1O15075 740 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 ATICP31939 592 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 GNL1P36915 607 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 P2RY2P41231 377 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 AMPD3Q01432 767 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 LMAN2Q12907 356 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 DHCR24Q15392 516 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 TDRD10Q5VZ19 366 aaKnown RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 EPM2AIP1Q7L775 607 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 SLITRK1Q96PX8 696 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 PNKPQ96T60 521 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 FGFBP2Q9BYJ0 223 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 ELOVL4Q9GZR5 314 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 RNF38Q9H0F5 515 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 PCIF1Q9H4Z3 704 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 VRTNQ9H8Y1 702 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 TMEM9BQ9NQ34 198 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 POLR3BQ9NW08 1133 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-206ENST00000479542 HSPBP1Q9NZL4 362 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 NUP205Q92621 2012 aa14.18□□□□□ -0.14
ABCF1-206ENST00000479542 PTPRJQ12913 1337 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms