RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 TTYH3Q9C0H2 523 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 TBX22Q9Y458 520 aa4.3□□□□□ -1.72
NCKAP1-204ENST00000477988 TCF20Q9UGU0 1960 aaKnown RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 GTPBP1O00178 669 aaKnown RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 PSG1P11464 419 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 ALDH5A1P51649 535 aaPredicted RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 NOP9Q86U38 636 aaKnown RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 ARFGAP1Q8N6T3 406 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 ATL2Q8NHH9 583 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 CCDC17Q96LX7 622 aa4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 NDRG4Q9ULP0 352 aaKnown RBP4.29□□□□□ -1.72
NCKAP1-204ENST00000477988 B4DGG1 531 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA12O60330 932 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 TULP3O75386 442 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 CNGA1P29973 690 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PDE6CP51160 858 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 ADKP55263 362 aaKnown RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 LILRA4P59901 499 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 ID2Q02363 134 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 ZNF91Q05481 1191 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 RNASE12Q5GAN4 147 aaKnown RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 TMEM63BQ5T3F8 832 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 ANO7Q6IWH7 933 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 BCDIN3DQ7Z5W3 292 aaKnown RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 DPCDQ9BVM2 203 aaPredicted RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 HEY2Q9UBP5 337 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 FEZ2Q9UHY8 353 aaPredicted RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 ICKQ9UPZ9 632 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA9Q9Y5G4 932 aaKnown RBP4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA8Q9Y5G5 932 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA7Q9Y5G6 932 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA6Q9Y5G7 932 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHGA3Q9Y5H0 932 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 PCDHA3Q9Y5H8 950 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 MRFAP1Q9Y605 127 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
NCKAP1-204ENST00000477988 XPOTO43592 962 aaKnown RBP4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 GCATO75600 419 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 RNF8O76064 485 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 TGFB3P10600 412 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 PHKG2P15735 406 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 HSD3B2P26439 372 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 THBS4P35443 961 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 IARSP41252 1262 aaKnown RBP4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 DAB2IPQ5VWQ8 1189 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 SLC15A3Q8IY34 581 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 PNISRQ8TF01 805 aaKnown RBP4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 ZFYVE19Q96K21 471 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 TEKT5Q96M29 485 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 ASIC5Q9NY37 505 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 SERPINB13Q9UIV8 391 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 SHOC2Q9UQ13 582 aa4.27□□□□□ -1.73
NCKAP1-204ENST00000477988 LRRC14BA6NHZ5 514 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 FPR3P25089 353 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 LRPAP1P30533 357 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 VIPR2P41587 438 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 CDKN2AP42771 156 aaKnown RBP4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 HK3P52790 923 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 SATB1Q01826 763 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 NOGQ13253 232 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 EMC10Q5UCC4 262 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 HEATR3Q7Z4Q2 680 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 NECAB2Q7Z6G3 386 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 ANKRD13BQ86YJ7 626 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 LIX1LQ8IVB5 337 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 OSCP1Q8WVF1 389 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 MAP4K1Q92918 833 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 FAM167AQ96KS9 214 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 SLC5A4Q9NY91 659 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 ABCF2Q9UG63 623 aa4.26□□□□□ -1.73
NCKAP1-204ENST00000477988 RPS13P62277 151 aaKnown RBP4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 RHDQ02161 417 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 CYP1B1Q16678 543 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 DGKKQ5KSL6 1271 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 COLCA1Q6ZS62 124 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 SIRT6Q8N6T7 355 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 ZNF548Q8NEK5 533 aaPredicted RBP4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 MMS19Q96T76 1030 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 SLCO5A1Q9H2Y9 848 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 TXLNGQ9NUQ3 528 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 TMEM184CQ9NVA4 438 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 AMFRQ9UKV5 643 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 PLEKHM1Q9Y4G2 1056 aa4.25□□□□□ -1.73
NCKAP1-204ENST00000477988 MT-CO1P00395 513 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 MT-CO3P00414 261 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 FGAP02671 866 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 CSF1RP07333 972 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 CTSAP10619 480 aa4.24□□□□□ -1.73
NCKAP1-204ENST00000477988 E2F1Q01094 437 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms