RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TWNKQ96RR1 684 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 CYTH2Q99418 400 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 CYTH4Q9UIA0 394 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 CNTN6Q9UQ52 1028 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 RBBP6Q7Z6E9 1792 aaKnown RBP17.51■□□□□ 0.39
TTC3-209ENST00000438055 TMEM63AO94886 807 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 ATG7O95352 703 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 ARIH2O95376 493 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 GCAP28676 217 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 TAF1BQ53T94 588 aaPredicted RBP17.51■□□□□ 0.39
TTC3-209ENST00000438055 BBS12Q6ZW61 710 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 CDT1Q9H211 546 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 SLC17A7Q9P2U7 560 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 CHKBQ9Y259 395 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 LACTBL1A8MY62 500 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 ACKR2O00590 384 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 MICAL2O94851 1124 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 ZBED1O96006 694 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 APRTP07741 180 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 STAG3L1P0CL83 205 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
TTC3-209ENST00000438055 BSPRYQ5W0U4 402 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 DRICH1Q6PGQ1 229 aaPredicted RBP17.51■□□□□ 0.39
TTC3-209ENST00000438055 OTOAQ7RTW8 1153 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 KIAA0319LQ8IZA0 1049 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 MIS12Q9H081 205 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
TTC3-209ENST00000438055 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
TTC3-209ENST00000438055 RASSF2P50749 326 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 YARSP54577 528 aaKnown RBP17.5■□□□□ 0.39
TTC3-209ENST00000438055 IRX4P78413 519 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 TARBP2Q15633 366 aaKnown RBP17.5■□□□□ 0.39
TTC3-209ENST00000438055 CCDC6Q16204 474 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 GJC2Q5T442 439 aaPredicted RBP17.5■□□□□ 0.39
TTC3-209ENST00000438055 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 SLC13A1Q9BZW2 595 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 ASCC2Q9H1I8 757 aaPredicted RBP17.5■□□□□ 0.39
TTC3-209ENST00000438055 FAM49BQ9NUQ9 324 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 MCM8Q9UJA3 840 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 IQANK1A0A1B0GTG1 560 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 DESP17661 470 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 TRIM55Q9BYV6 548 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 YY1AP1Q9H869 796 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 MINDY3Q9H8M7 445 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 WDR35Q9P2L0 1181 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 GRID1Q9ULK0 1009 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 CLUHO75153 1309 aa17.5■□□□□ 0.39
TTC3-209ENST00000438055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.49■□□□□ 0.39
TTC3-209ENST00000438055 KBTBD13C9JR72 458 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 CCND1P24385 295 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 GALNTL6Q49A17 601 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 LBX2Q6XYB7 198 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 RELL1Q8IUW5 271 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 MAP7D3Q8IWC1 876 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 NLRP7Q8WX94 980 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 TMEM176AQ96HP8 235 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 HPDLQ96IR7 371 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 R3HDMLQ9H3Y0 253 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 RNF19AQ9NV58 838 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 KAT6AQ92794 2004 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 ZWINTO95229 277 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 EPHB2P29323 1055 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 BCAR1P56945 870 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 DPYSL3Q14195 570 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 KBTBD12Q3ZCT8 623 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 CASC4Q6P4E1 433 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 LRRC6Q86X45 466 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 C1orf127Q8N9H9 656 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 MANSC1Q9H8J5 431 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 A0A087WZ62 844 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 CCDC195A0A1B0GUA6 201 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 RAD23BP54727 409 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
TTC3-209ENST00000438055 TFDP2Q14188 446 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 POLNQ7Z5Q5 900 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 XYLT1Q86Y38 959 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 MCUR1Q96AQ8 359 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 FDXACB1Q9BRP7 624 aaPredicted RBP17.49■□□□□ 0.39
TTC3-209ENST00000438055 FAM167BQ9BTA0 163 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 TSSK1BQ9BXA7 367 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 XYLT2Q9H1B5 865 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 RSAD1Q9HA92 442 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 DOCK5Q9H7D0 1870 aa17.49■□□□□ 0.39
TTC3-209ENST00000438055 PRPF4O43172 522 aaKnown RBP eCLIP17.48■□□□□ 0.395e-17■■□□□ 14.5
TTC3-209ENST00000438055 VTNP04004 478 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ERFP50548 548 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 SLC25A11Q02978 314 aaKnown RBP17.48■□□□□ 0.39
TTC3-209ENST00000438055 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 PPP1R14CQ8TAE6 165 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 ELOVL4Q9GZR5 314 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 PCDHGC3Q9UN70 934 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 APOC4-APOC2K7ER74 178 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 APOC2P02655 101 aa17.48■□□□□ 0.39
TTC3-209ENST00000438055 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms