RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 STILQ15468 1287 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 ALFQ53S48 1182 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 CDC42EP4Q9H3Q1 356 aaKnown RBP12.53□□□□□ -0.4
LAMA4-207ENST00000424408 WWOXQ9NZC7 414 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 GTF2A1LQ9UNN4 478 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 CPDO75976 1380 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 MED26O95402 600 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 DGUOKQ16854 277 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
LAMA4-207ENST00000424408 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 DDX50Q9BQ39 737 aaKnown RBP12.53□□□□□ -0.4
LAMA4-207ENST00000424408 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 ADGBQ8N7X0 1667 aa12.53□□□□□ -0.4
LAMA4-207ENST00000424408 AHCYL1O43865 530 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 TGM2P21980 687 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 GLRBP48167 497 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.4
LAMA4-207ENST00000424408 NANOGNBQ7Z5D8 188 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 SLC7A14Q8TBB6 771 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 NARS2Q96I59 477 aaKnown RBP12.52□□□□□ -0.4
LAMA4-207ENST00000424408 MKNK1Q9BUB5 465 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 SNX9Q9Y5X1 595 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.4
LAMA4-207ENST00000424408 ASNSP08243 561 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 GTF2H1P32780 548 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 MTFR1Q15390 333 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.4
LAMA4-207ENST00000424408 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.4
LAMA4-207ENST00000424408 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.4
LAMA4-207ENST00000424408 KRT20P35900 424 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CCT8P50990 548 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 EFNA5P52803 228 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CNGA2Q16280 664 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 GOLGA7BQ2TAP0 167 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 FBXO40Q9UH90 709 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 TMCC3Q9ULS5 477 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 PDGFRBP09619 1106 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 EPHB2P29323 1055 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 FDFT1P37268 417 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CSE1LP55060 971 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CSNK2BP67870 215 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ITGADQ13349 1161 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ZNF483Q8TF39 744 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 SERPINH1P50454 418 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 HERVK_113P62684 666 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 DDR2Q16832 855 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ATP6AP1LQ52LC2 224 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ATG16L2Q8NAA4 619 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 FAM45AQ8TCE6 357 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-207ENST00000424408 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
LAMA4-207ENST00000424408 HEATR9A2RTY3 570 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 UBXN8O00124 270 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 RARGP13631 454 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 PSMA3P25788 255 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TRAF3Q13114 568 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 AKIRIN2Q53H80 203 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 C11orf63Q6NUN7 778 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 OLFM1Q99784 485 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 FAM192AQ9GZU8 254 aa12.51□□□□□ -0.41
LAMA4-207ENST00000424408 TRPC7Q9HCX4 862 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms