RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 RIPK1Q13546 671 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ABTB1Q969K4 478 aaPredicted RBP16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 PRMT7Q9NVM4 692 aaPredicted RBP16.41■□□□□ 0.22
CCDC85A-201ENST00000407595 ZBED1O96006 694 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 ATP4AP20648 1035 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 YY1P25490 414 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 RPA3P35244 121 aaPredicted RBP16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 PDE1BQ01064 536 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 KIAA0319LQ8IZA0 1049 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 NSL1Q96IY1 281 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 TMEM121Q9BTD3 319 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 DCLK3Q9C098 648 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SIX2Q9NPC8 291 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 GPATCH2LQ9NWQ4 482 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SLC1A1P43005 524 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SP2Q02086 613 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 CRLF3Q8IUI8 442 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SNTG2Q9NY99 539 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 ARMCX1Q9P291 453 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 STXBP5LQ9Y2K9 1186 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 KCNA2P16389 499 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 SSTR1P30872 391 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 GTF2BQ00403 316 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 UBAP2Q5T6F2 1119 aaKnown RBP16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 RWDD4Q6NW29 188 aaKnown RBP16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 FAM117BQ6P1L5 589 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 FAF2Q96CS3 445 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 C10orf88Q9H8K7 445 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 NCANO14594 1321 aa16.4■□□□□ 0.22
CCDC85A-201ENST00000407595 ETS1P14921 441 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 ADRA1DP25100 572 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 PTPN4P29074 926 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 RASSF3Q86WH2 238 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 ST13P4Q8IZP2 240 aaPredicted RBP16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 TSNARE1Q96NA8 513 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 FZD9O00144 591 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 KIF3CO14782 793 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 MAGEB2O15479 319 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 STAMBPO95630 424 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 PECAM1P16284 738 aaPredicted RBP16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 MUTP22033 750 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 OAZ1P54368 228 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 KLHL38Q2WGJ6 581 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 FAXCQ5TGI0 409 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 NUDCD3Q8IVD9 361 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 CYP4X1Q8N118 509 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 ATP2A3Q93084 1043 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 NDC80O14777 642 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 SNUPNO95149 360 aaKnown RBP16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 RBP5P82980 135 aa16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 ARID3BQ8IVW6 561 aaPredicted RBP16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 SREK1Q8WXA9 508 aaKnown RBP16.39■□□□□ 0.21
CCDC85A-201ENST00000407595 KRT37O76014 449 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 ARL4AP40617 200 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 PTGIRP43119 386 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 ATP13A4Q4VNC1 1196 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 RABGAP1LQ5R372 815 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 DDX50Q9BQ39 737 aaKnown RBP16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 IP6K2Q9UHH9 426 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 SLC4A7Q9Y6M7 1214 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 SOWAHBA6NEL2 793 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 CFLARO15519 480 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 LGALS2P05162 132 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 TGFB3P10600 412 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 PEX5P50542 639 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 JAM2P57087 298 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 AP2B1P63010 937 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 NXNQ6DKJ4 435 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 SLC25A41Q8N5S1 370 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 KCTD17Q8N5Z5 321 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 DNAAF3Q8N9W5 541 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 MTMR14Q8NCE2 650 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 FAM13CQ8NE31 585 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 XPNPEP1Q9NQW7 623 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 P4HA2O15460 535 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 STK10O94804 968 aaKnown RBP16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 CUL3Q13618 768 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 SCG3Q8WXD2 468 aaKnown RBP16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 MTBPQ96DY7 904 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 KIAA0100Q14667 2235 aaKnown RBP16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 COL4A1P02462 1669 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
CCDC85A-201ENST00000407595 UBR2Q8IWV8 1755 aa16.37■□□□□ 0.21
CCDC85A-201ENST00000407595 CST8O60676 142 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms