RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 DCP1BQ8IZD4 617 aaKnown RBP17.34■□□□□ 0.37
NID1-202ENST00000366595 NT5C1AQ9BXI3 368 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 ARMC7Q9H6L4 198 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 H7C1W4 665 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 PCSK1P29120 753 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 CDK20Q8IZL9 346 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 TFB1MQ8WVM0 346 aaKnown RBP17.34■□□□□ 0.37
NID1-202ENST00000366595 DNAJC7Q99615 494 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 DOLKQ9UPQ8 538 aa17.34■□□□□ 0.37
NID1-202ENST00000366595 DYRK3O43781 588 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 CLTBP09497 229 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 DPYDQ12882 1025 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 MAPK7Q13164 816 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 SLC13A5Q86YT5 568 aaPredicted RBP17.33■□□□□ 0.37
NID1-202ENST00000366595 RORBQ92753 470 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 KCNB2Q92953 911 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 SLITRK2Q9H156 845 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 TMEM8AQ9HCN3 771 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 KLHL28Q9NXS3 571 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 RNF112Q9ULX5 631 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 PTCH1Q13635 1447 aa17.33■□□□□ 0.37
NID1-202ENST00000366595 FAM20BO75063 409 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 TSNQ15631 228 aaKnown RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 CLEC16AQ2KHT3 1053 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 FUT11Q495W5 492 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 AHI1Q8N157 1196 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 DPF2Q92785 391 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 IRX2Q9BZI1 471 aaPredicted RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 PAIP1Q9H074 479 aaKnown RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 RXFP1Q9HBX9 757 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 CD209Q9NNX6 404 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 GJB4Q9NTQ9 266 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 SLC24A2Q9UI40 661 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 GTF3C4Q9UKN8 822 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 EPB42P16452 691 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 CCT3P49368 545 aaKnown RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 CDC16Q13042 620 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 TYW3Q6IPR3 259 aaKnown RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 CDC73Q6P1J9 531 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 TDP2O95551 362 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 SLC2A3P11169 496 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 RARGP13631 454 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 TGM2P21980 687 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 GPC1P35052 558 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 SERPINB5P36952 375 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 ZNF57Q68EA5 555 aaPredicted RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 BNIPLQ7Z465 357 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 RNF149Q8NC42 400 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.364e-17■■■□□ 17
NID1-202ENST00000366595 AAR2Q9Y312 384 aaKnown RBP17.33■□□□□ 0.36
NID1-202ENST00000366595 STARD13Q9Y3M8 1113 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.36
NID1-202ENST00000366595 ECDO95905 644 aaPredicted RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 PRLRP16471 622 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 WARSP23381 471 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 IL5RAQ01344 420 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TWF1Q12792 350 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 ATP1A4Q13733 1029 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 PCSK7Q16549 785 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 DENND6AQ8IWF6 608 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 REXO4Q9GZR2 422 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 C2orf81A6NN90 581 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 NMT1P30419 496 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 PRKAA2P54646 552 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 ZCCHC8Q6NZY4 707 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 SLC25A41Q8N5S1 370 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TC2NQ8N9U0 490 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 MMADHCQ9H3L0 296 aaPredicted RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 WDR41Q9HAD4 459 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TMBIM4Q9HC24 238 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 DRG1Q9Y295 367 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 C1orf232A0A0U1RR37 186 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 STX4Q12846 297 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TRAF3Q13114 568 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 SV2CQ496J9 727 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 KCNT1Q5JUK3 1230 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 ANKS6Q68DC2 871 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 EPHX4Q8IUS5 362 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 ADGRF4Q8IZF3 695 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 TINF2Q9BSI4 451 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 KIFC1Q9BW19 673 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 MYLK2Q9H1R3 596 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 KCNF1Q9H3M0 494 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 NOL6Q9H6R4 1146 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 JPH1Q9HDC5 661 aaPredicted RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 POLG2Q9UHN1 485 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 RAD17O75943 681 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 POU1F1P28069 291 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 ALFQ53S48 1182 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 FAM120BQ96EK7 910 aaKnown RBP17.32■□□□□ 0.36
NID1-202ENST00000366595 HPS4Q9NQG7 708 aa17.32■□□□□ 0.36
NID1-202ENST00000366595 GTF2A1LQ9UNN4 478 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms