RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	ECM14	P38836	430 aa		4.7	□□□□□ -1.66
VMA4	YOR332W	MST28	P39552	234 aa		4.7	□□□□□ -1.66
VMA4	YOR332W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
VMA4	YOR332W	ADH6	Q04894	360 aa	Known RBP	4.7	□□□□□ -1.66
VMA4	YOR332W	SCW10	Q04951	389 aa		4.7	□□□□□ -1.66
VMA4	YOR332W	YLR112W	Q12130	139 aa		4.7	□□□□□ -1.66
VMA4	YOR332W	IRA2	P19158	3079 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	AQY1	P0CD91	305 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	HYP2	P23301	157 aa	Known RBP	4.69	□□□□□ -1.66
VMA4	YOR332W	SPI1	P40092	148 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	YIP1	P53039	248 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	FCF1	Q05498	189 aa	Predicted RBP	4.69	□□□□□ -1.66
VMA4	YOR332W	SNA4	Q07549	140 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	GEP3	Q08622	556 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
VMA4	YOR332W	YDL009C	Q12210	107 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	SLO1	Q3E784	85 aa		4.69	□□□□□ -1.66
VMA4	YOR332W	ADH1	P00330	348 aa	Known RBP	4.68	□□□□□ -1.66
VMA4	YOR332W	PFY1	P07274	126 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	GPI18	P38211	433 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	YHR140W	P38842	239 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	SNF11	P38956	169 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	YER076C	P40049	302 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	YPL073C	P40323	161 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	MST27	P53176	234 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	RPL15B	P54780	204 aa	Predicted RBP	4.68	□□□□□ -1.66
VMA4	YOR332W	IRC23	Q08416	157 aa		4.68	□□□□□ -1.66
VMA4	YOR332W	IES6	P32617	166 aa		4.67	□□□□□ -1.66
VMA4	YOR332W	YKR041W	P36134	250 aa		4.67	□□□□□ -1.66
VMA4	YOR332W	TIM22	Q12328	207 aa		4.67	□□□□□ -1.66
VMA4	YOR332W	MRPL38	P35996	138 aa	Predicted RBP	4.66	□□□□□ -1.66
VMA4	YOR332W	YKL070W	P36087	169 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	YEL067C	P39978	195 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	SNU13	P39990	126 aa	Known RBP	4.66	□□□□□ -1.66
VMA4	YOR332W	TOS6	P48560	102 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	ELC1	Q03071	99 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	PBP4	Q07362	185 aa	Known RBP	4.66	□□□□□ -1.66
VMA4	YOR332W	YPL278C	Q08990	100 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	JID1	Q12350	301 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	YCL048W-A	Q2V2Q2	79 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	COA3	Q3E7B2	85 aa		4.66	□□□□□ -1.66
VMA4	YOR332W	YDL022C-A	P0C5L6	82 aa		4.65	□□□□□ -1.67
VMA4	YOR332W	YGL260W	P53056	76 aa		4.65	□□□□□ -1.67
VMA4	YOR332W	UBC7	Q02159	165 aa		4.65	□□□□□ -1.67
VMA4	YOR332W	YOL160W	Q08321	113 aa		4.65	□□□□□ -1.67
VMA4	YOR332W	FCY1	Q12178	158 aa		4.65	□□□□□ -1.67
VMA4	YOR332W	CDC43	P18898	376 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	YER121W	P40076	114 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	WWM1	P43582	211 aa	Known RBP	4.64	□□□□□ -1.67
VMA4	YOR332W	YGR219W	P53307	113 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	ATP23	P53722	227 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	YNR077C	P53758	84 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	MSA1	Q08471	629 aa		4.64	□□□□□ -1.67
VMA4	YOR332W	HMRA2	P0CY13	119 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	AGA1	P32323	725 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	KTI12	P34253	313 aa	Known RBP	4.63	□□□□□ -1.67
VMA4	YOR332W	YPT53	P36019	220 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	POR2	P40478	281 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	LCB3	P47013	409 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	PRM3	Q08931	133 aa		4.63	□□□□□ -1.67
VMA4	YOR332W	YER181C	P40097	107 aa		4.62	□□□□□ -1.67
VMA4	YOR332W	BNA1	P47096	177 aa		4.62	□□□□□ -1.67
VMA4	YOR332W	YPL261C	Q08976	102 aa		4.62	□□□□□ -1.67
VMA4	YOR332W	COX17	Q12287	69 aa		4.62	□□□□□ -1.67
VMA4	YOR332W	IRA1	P18963	3092 aa		4.62	□□□□□ -1.67
VMA4	YOR332W	RPL32	P38061	130 aa	Known RBP	4.61	□□□□□ -1.67
VMA4	YOR332W	OXA1	P39952	402 aa		4.61	□□□□□ -1.67
VMA4	YOR332W	MRPL49	P40858	161 aa	Predicted RBP	4.61	□□□□□ -1.67
VMA4	YOR332W	YGR025W	P53216	100 aa		4.61	□□□□□ -1.67
VMA4	YOR332W	DIA1	P54005	336 aa		4.61	□□□□□ -1.67
VMA4	YOR332W	YOR097C	Q12274	175 aa	Predicted RBP	4.61	□□□□□ -1.67
VMA4	YOR332W	MIC12	P38341	106 aa		4.6	□□□□□ -1.67
VMA4	YOR332W	YNL217W	P40152	326 aa		4.6	□□□□□ -1.67
VMA4	YOR332W	YML122C	Q03207	126 aa		4.6	□□□□□ -1.67
VMA4	YOR332W	VTC1	P40046	129 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
VMA4	YOR332W	YFR057W	P43625	151 aa		4.59	□□□□□ -1.67
VMA4	YOR332W	GLO1	P50107	326 aa		4.59	□□□□□ -1.67
VMA4	YOR332W	YER175W-A	Q8TGU4	54 aa		4.59	□□□□□ -1.67
VMA4	YOR332W	RPL42A	P0CX27	106 aa	Known RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	RPL42B	P0CX28	106 aa	Known RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	RPS8A	P0CX39	200 aa	Known RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	RPS8B	P0CX40	200 aa	Known RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	PHO85	P17157	305 aa		4.58	□□□□□ -1.68
VMA4	YOR332W	NHP2	P32495	156 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	AIM11	P87275	137 aa		4.58	□□□□□ -1.68
VMA4	YOR332W	MRPL23	Q12487	163 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA4	YOR332W	IGO2	Q9P305	131 aa		4.58	□□□□□ -1.68
VMA4	YOR332W	YHR022C	P38763	256 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	OST2	P46964	130 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	SBH2	P52871	88 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	YMR181C	Q03231	154 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	LSM6	Q06406	86 aa	Known RBP	4.57	□□□□□ -1.68
VMA4	YOR332W	CCW12	Q12127	133 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	YBR200W-A	Q3E755	54 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	YOR008C-A	Q3E7B9	74 aa		4.57	□□□□□ -1.68
VMA4	YOR332W	VAR1	P02381	398 aa		4.56	□□□□□ -1.68
VMA4	YOR332W	AIM34	Q03673	198 aa		4.56	□□□□□ -1.68
VMA4	YOR332W	YBR056W-A	I2HB52	66 aa		4.55	□□□□□ -1.68
VMA4	YOR332W	CCW14	O13547	238 aa		4.55	□□□□□ -1.68
VMA4	YOR332W	ATX1	P38636	73 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms