RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C HAL1Q01766 294 aa4□□□□□ -1.77
PSE1YMR308C YPL038W-AQ3E7B4 63 aa4□□□□□ -1.77
PSE1YMR308C IMP1P28627 190 aa4□□□□□ -1.77
PSE1YMR308C YEL045CP32616 141 aa4□□□□□ -1.77
PSE1YMR308C PGU1P47180 361 aa4□□□□□ -1.77
PSE1YMR308C USV1Q12132 391 aa4□□□□□ -1.77
PSE1YMR308C YML100W-AQ8TGT0 57 aa4□□□□□ -1.77
PSE1YMR308C TIM12P32830 109 aa3.99□□□□□ -1.77
PSE1YMR308C PCL5P38794 229 aa3.99□□□□□ -1.77
PSE1YMR308C YDR102CQ03864 110 aa3.99□□□□□ -1.77
PSE1YMR308C PCL9Q12477 304 aa3.99□□□□□ -1.77
PSE1YMR308C YDR381C-AQ3E6R5 114 aa3.99□□□□□ -1.77
PSE1YMR308C RPB9P27999 122 aa3.99□□□□□ -1.77
PSE1YMR308C FLO5P38894 1075 aa3.99□□□□□ -1.77
PSE1YMR308C TDA2P40045 126 aa3.99□□□□□ -1.77
PSE1YMR308C YER135CP40082 130 aa3.99□□□□□ -1.77
PSE1YMR308C YIL169CP40442 995 aa3.99□□□□□ -1.77
PSE1YMR308C LST8P41318 303 aa3.99□□□□□ -1.77
PSE1YMR308C CIS3P47001 227 aa3.99□□□□□ -1.77
PSE1YMR308C RPL21AQ02753 160 aaKnown RBP3.99□□□□□ -1.77
PSE1YMR308C YOR105WQ08504 108 aa3.99□□□□□ -1.77
PSE1YMR308C RPL21BQ12672 160 aaKnown RBP3.99□□□□□ -1.77
PSE1YMR308C ASK1P35734 292 aa3.98□□□□□ -1.77
PSE1YMR308C ICY1Q04329 127 aa3.98□□□□□ -1.77
PSE1YMR308C TDA8Q6B2U8 126 aa3.98□□□□□ -1.77
PSE1YMR308C RPS8AP0CX39 200 aaKnown RBP3.98□□□□□ -1.77
PSE1YMR308C RPS8BP0CX40 200 aaKnown RBP3.98□□□□□ -1.77
PSE1YMR308C FZF1P32805 299 aa3.98□□□□□ -1.77
PSE1YMR308C GPX1P36014 167 aa3.98□□□□□ -1.77
PSE1YMR308C DFG10P40526 253 aa3.98□□□□□ -1.77
PSE1YMR308C MZM1Q03429 123 aaPredicted RBP3.98□□□□□ -1.77
PSE1YMR308C MIX14Q04341 121 aa3.98□□□□□ -1.77
PSE1YMR308C MDM35O60200 86 aa3.97□□□□□ -1.77
PSE1YMR308C YKR045CP36138 183 aa3.97□□□□□ -1.77
PSE1YMR308C TES1P41903 349 aaKnown RBP3.97□□□□□ -1.77
PSE1YMR308C YDL242WQ07746 117 aa3.97□□□□□ -1.77
PSE1YMR308C YER175W-AQ8TGU4 54 aa3.97□□□□□ -1.77
PSE1YMR308C MHF2Q3E829 80 aa3.97□□□□□ -1.77
PSE1YMR308C MRPL31P14063 131 aaPredicted RBP3.97□□□□□ -1.77
PSE1YMR308C MRPL39P36533 70 aa3.97□□□□□ -1.77
PSE1YMR308C YPT10P38146 199 aa3.97□□□□□ -1.77
PSE1YMR308C IGO1P53897 168 aa3.97□□□□□ -1.77
PSE1YMR308C LSM6Q06406 86 aaKnown RBP3.97□□□□□ -1.77
PSE1YMR308C ICS3P47034 131 aa3.96□□□□□ -1.78
PSE1YMR308C SWT21P53873 357 aaPredicted RBP3.96□□□□□ -1.78
PSE1YMR308C CYR1P08678 2026 aaKnown RBP3.96□□□□□ -1.78
PSE1YMR308C MRP10O75012 95 aa3.96□□□□□ -1.78
PSE1YMR308C FPR2P32472 135 aa3.96□□□□□ -1.78
PSE1YMR308C TPC1P53257 314 aa3.96□□□□□ -1.78
PSE1YMR308C COX12Q01519 83 aa3.96□□□□□ -1.78
PSE1YMR308C YLR146W-AQ2V2P1 62 aa3.96□□□□□ -1.78
PSE1YMR308C YGR045CP53229 120 aa3.95□□□□□ -1.78
PSE1YMR308C YMR295CQ03559 197 aa3.95□□□□□ -1.78
PSE1YMR308C YAR068WP39564 161 aa3.94□□□□□ -1.78
PSE1YMR308C NRM1P53718 249 aa3.94□□□□□ -1.78
PSE1YMR308C YDR274CP87283 123 aa3.94□□□□□ -1.78
PSE1YMR308C FYV12Q08559 129 aa3.94□□□□□ -1.78
PSE1YMR308C YCR025CP25352 136 aa3.94□□□□□ -1.78
PSE1YMR308C STT4P37297 1900 aa3.94□□□□□ -1.78
PSE1YMR308C YER187WP40102 141 aa3.94□□□□□ -1.78
PSE1YMR308C MIM1Q08176 113 aa3.94□□□□□ -1.78
PSE1YMR308C PAU2P32612 120 aa3.93□□□□□ -1.78
PSE1YMR308C PCP1P53259 346 aa3.93□□□□□ -1.78
PSE1YMR308C PTH1P38876 190 aaKnown RBP3.93□□□□□ -1.78
PSE1YMR308C VTC1P40046 129 aaRIP-Chip data3.93□□□□□ -1.78not detected
PSE1YMR308C YFL012WP43580 148 aa3.93□□□□□ -1.78
PSE1YMR308C YOL014WQ08110 124 aa3.93□□□□□ -1.78
PSE1YMR308C YEL028WP39989 153 aa3.92□□□□□ -1.78
PSE1YMR308C PIR1Q03178 341 aa3.92□□□□□ -1.78
PSE1YMR308C YMR030W-AQ3E760 96 aa3.92□□□□□ -1.78
PSE1YMR308C YMR181CQ03231 154 aa3.92□□□□□ -1.78
PSE1YMR308C SMT3Q12306 101 aaKnown RBP3.92□□□□□ -1.78
PSE1YMR308C YKL023C-AQ2V2P3 75 aa3.92□□□□□ -1.78
PSE1YMR308C RSM18P40033 138 aa3.92□□□□□ -1.78
PSE1YMR308C PAU12P53343 120 aa3.92□□□□□ -1.78
PSE1YMR308C RPL42AP0CX27 106 aaKnown RBP3.91□□□□□ -1.78
PSE1YMR308C RPL42BP0CX28 106 aaKnown RBP3.91□□□□□ -1.78
PSE1YMR308C YIL014C-AQ02598 104 aa3.91□□□□□ -1.78
PSE1YMR308C FSH2Q05015 223 aa3.91□□□□□ -1.78
PSE1YMR308C YKL018C-AQ3E7A7 99 aa3.91□□□□□ -1.78
PSE1YMR308C EDC2P40023 145 aaPredicted RBP3.91□□□□□ -1.78
PSE1YMR308C BRP1P53194 125 aa3.91□□□□□ -1.78
PSE1YMR308C LPP1Q04396 274 aa3.91□□□□□ -1.78
PSE1YMR308C PMD1P32634 1753 aa3.91□□□□□ -1.78
PSE1YMR308C MIX17Q03667 156 aa3.9□□□□□ -1.78
PSE1YMR308C UBR2Q07963 1872 aa3.9□□□□□ -1.78
PSE1YMR308C SOD1P00445 154 aaKnown RBP3.9□□□□□ -1.78
PSE1YMR308C YBL059WP34224 193 aa3.9□□□□□ -1.78
PSE1YMR308C DSE2P38844 325 aa3.9□□□□□ -1.78
PSE1YMR308C HUR1P45820 110 aa3.9□□□□□ -1.78
PSE1YMR308C FYV5P25585 152 aa3.9□□□□□ -1.79
PSE1YMR308C YFL015CP43578 164 aa3.9□□□□□ -1.79
PSE1YMR308C YLR346CQ06139 101 aa3.9□□□□□ -1.79
PSE1YMR308C PAU1P0CE88 120 aa3.89□□□□□ -1.79
PSE1YMR308C PAU14P0CE89 120 aa3.89□□□□□ -1.79
PSE1YMR308C PAU6P0CE90 120 aa3.89□□□□□ -1.79
PSE1YMR308C PAU18P0CE91 120 aa3.89□□□□□ -1.79
PSE1YMR308C PAU8P0CE92 120 aa3.89□□□□□ -1.79
PSE1YMR308C PAU11P0CE93 120 aa3.89□□□□□ -1.79
PSE1YMR308C AGA2P32781 87 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms