RNA–Protein interactions for RNA: YMR140W

SIP5, Transcript of Protein of unknown function, yeast

Gene SIP5, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP5	YMR140W	YMR316C-A	I2HB70	103 aa		4.29	□□□□□ -1.72
SIP5	YMR140W	RPB8	P20436	146 aa		4.29	□□□□□ -1.72
SIP5	YMR140W	LST8	P41318	303 aa		4.29	□□□□□ -1.72
SIP5	YMR140W	VPS13	Q07878	3144 aa		4.29	□□□□□ -1.72
SIP5	YMR140W	MRPL31	P14063	131 aa	Predicted RBP	4.28	□□□□□ -1.72
SIP5	YMR140W	RPL32	P38061	130 aa	Known RBP	4.28	□□□□□ -1.72
SIP5	YMR140W	GLO1	P50107	326 aa		4.28	□□□□□ -1.72
SIP5	YMR140W	MST27	P53176	234 aa		4.28	□□□□□ -1.72
SIP5	YMR140W	MSA1	Q08471	629 aa		4.28	□□□□□ -1.72
SIP5	YMR140W	YBR255C-A	Q3E776	120 aa		4.28	□□□□□ -1.72
SIP5	YMR140W	SFT2	P38166	215 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	RRT13	P40042	185 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	SFT1	P43682	97 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	PIR1	Q03178	341 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	USV1	Q12132	391 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	IGO2	Q9P305	131 aa		4.27	□□□□□ -1.73
SIP5	YMR140W	PIS1	P06197	220 aa	Known RBP	4.26	□□□□□ -1.73
SIP5	YMR140W	BET1	P22804	142 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	NCA3	P46955	337 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	CIS3	P47001	227 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	VPS55	P47111	140 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	RSM19	P53733	91 aa	Predicted RBP	4.26	□□□□□ -1.73
SIP5	YMR140W	EMC6	Q12431	108 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	KSH1	Q8TGJ3	72 aa		4.26	□□□□□ -1.73
SIP5	YMR140W	MRS3	P10566	314 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	REC104	P33323	182 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	DSE2	P38844	325 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	UBC13	P52490	153 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	YPL261C	Q08976	102 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	TOR1	P35169	2470 aa		4.25	□□□□□ -1.73
SIP5	YMR140W	MDM35	O60200	86 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	RPL20A	P0CX23	172 aa	Known RBP	4.24	□□□□□ -1.73
SIP5	YMR140W	RPL20B	P0CX24	172 aa	Predicted RBP	4.24	□□□□□ -1.73
SIP5	YMR140W	FMP46	P36141	133 aa	Known RBP	4.24	□□□□□ -1.73
SIP5	YMR140W	YSY6	P38374	65 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	YHR180W	P38868	163 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	YFL051C	P43552	160 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	YDR381C-A	Q3E6R5	114 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	RPL30	P14120	105 aa	Known RBP	4.24	□□□□□ -1.73
SIP5	YMR140W	TOM40	P23644	387 aa	Known RBP	4.24	□□□□□ -1.73
SIP5	YMR140W	ROX3	P25046	220 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SIP5	YMR140W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SIP5	YMR140W	YGR219W	P53307	113 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	YNL046W	P53956	172 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	IRC19	Q07843	230 aa		4.24	□□□□□ -1.73
SIP5	YMR140W	RPL28	P02406	149 aa	Known RBP	4.23	□□□□□ -1.73
SIP5	YMR140W	RPL18A	P0CX49	186 aa	Known RBP	4.23	□□□□□ -1.73
SIP5	YMR140W	RPL18B	P0CX50	186 aa	Known RBP	4.23	□□□□□ -1.73
SIP5	YMR140W	RPL16B	P26785	198 aa	Known RBP	4.23	□□□□□ -1.73
SIP5	YMR140W	FPR2	P32472	135 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	LYS1	P38998	373 aa	RIP-Chip data	4.23	□□□□□ -1.73	RIP-Chip
SIP5	YMR140W	MBB1	P39534	108 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	YAR029W	P39549	74 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	SIM1	P40472	476 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	VEL1	P53058	206 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	HAL1	Q01766	294 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	YDR209C	Q03480	137 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	FIT2	Q08906	153 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	YGL258W-A	Q3E740	77 aa		4.23	□□□□□ -1.73
SIP5	YMR140W	RPS8A	P0CX39	200 aa	Known RBP	4.22	□□□□□ -1.73
SIP5	YMR140W	RPS8B	P0CX40	200 aa	Known RBP	4.22	□□□□□ -1.73
SIP5	YMR140W	UBC4	P15731	148 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	PEX22	P39718	180 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	YER079W	P40052	210 aa	Known RBP	4.22	□□□□□ -1.73
SIP5	YMR140W	YIA6	P40556	373 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	YMR254C	Q04838	102 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	YLR112W	Q12130	139 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	YOR343C	Q12484	108 aa		4.22	□□□□□ -1.73
SIP5	YMR140W	ARF2	P19146	181 aa	Known RBP	4.21	□□□□□ -1.74
SIP5	YMR140W	SWD3	P38123	315 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	HSK3	P69852	69 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	NCE101	Q02820	53 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	MGR2	Q02889	113 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	MIX14	Q04341	121 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	YLR281C	Q05863	155 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	RRS1	Q08746	203 aa	Known RBP	4.21	□□□□□ -1.74
SIP5	YMR140W	COX17	Q12287	69 aa		4.21	□□□□□ -1.74
SIP5	YMR140W	PFY1	P07274	126 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	RPL42A	P0CX27	106 aa	Known RBP	4.2	□□□□□ -1.74
SIP5	YMR140W	RPL42B	P0CX28	106 aa	Known RBP	4.2	□□□□□ -1.74
SIP5	YMR140W	YER187W	P40102	141 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	AIM19	P40502	157 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	YNR077C	P53758	84 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	SWS2	P53937	143 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	YLR194C	Q05777	254 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	PBA1	Q05778	276 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	YMR175W-A	Q3E766	64 aa		4.2	□□□□□ -1.74
SIP5	YMR140W	MED6	P38782	295 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	TOM7	P53507	60 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	DAD4	P69851	72 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	YMR317W	Q04893	1140 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	GAT3	Q07928	141 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	IRC23	Q08416	157 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	YOR387C	Q08910	206 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	YNL162W-A	Q3E7A8	72 aa		4.19	□□□□□ -1.74
SIP5	YMR140W	LDB16	P25587	256 aa		4.18	□□□□□ -1.74
SIP5	YMR140W	PET8	P38921	284 aa		4.18	□□□□□ -1.74
SIP5	YMR140W	TOS6	P48560	102 aa		4.18	□□□□□ -1.74
SIP5	YMR140W	TIM22	Q12328	207 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms