RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C YKR032WP36127 104 aa3.58□□□□□ -1.84
TVP38YKR088C ECM14P38836 430 aa3.58□□□□□ -1.84
TVP38YKR088C YJL213WP40896 331 aa3.58□□□□□ -1.84
TVP38YKR088C UTP23Q12339 254 aaKnown RBP3.58□□□□□ -1.84
TVP38YKR088C FOL3Q12676 427 aaPredicted RBP3.58□□□□□ -1.84
TVP38YKR088C ADH1P00330 348 aaKnown RBP3.57□□□□□ -1.84
TVP38YKR088C RPL27AP0C2H6 136 aaKnown RBP3.57□□□□□ -1.84
TVP38YKR088C MRPL20P22354 195 aaPredicted RBP3.57□□□□□ -1.84
TVP38YKR088C TIR2P33890 251 aa3.57□□□□□ -1.84
TVP38YKR088C YBR220CP38318 560 aa3.57□□□□□ -1.84
TVP38YKR088C MST28P39552 234 aa3.57□□□□□ -1.84
TVP38YKR088C GLE2P40066 365 aa3.57□□□□□ -1.84
TVP38YKR088C NCA3P46955 337 aa3.57□□□□□ -1.84
TVP38YKR088C SUR7P54003 302 aa3.57□□□□□ -1.84
TVP38YKR088C MGR2Q02889 113 aa3.57□□□□□ -1.84
TVP38YKR088C GPI19Q04082 140 aa3.57□□□□□ -1.84
TVP38YKR088C YMR103CQ04436 120 aa3.57□□□□□ -1.84
TVP38YKR088C DGA1Q08650 418 aa3.57□□□□□ -1.84
TVP38YKR088C DFM1Q12743 341 aaKnown RBP3.57□□□□□ -1.84
TVP38YKR088C YLR342W-AQ3E810 57 aa3.57□□□□□ -1.84
TVP38YKR088C RPL42AP0CX27 106 aaKnown RBP3.56□□□□□ -1.84
TVP38YKR088C RPL42BP0CX28 106 aaKnown RBP3.56□□□□□ -1.84
TVP38YKR088C CMC1P36064 111 aa3.56□□□□□ -1.84
TVP38YKR088C ADH5P38113 351 aaKnown RBP3.56□□□□□ -1.84
TVP38YKR088C SNF11P38956 169 aa3.56□□□□□ -1.84
TVP38YKR088C MBB1P39534 108 aa3.56□□□□□ -1.84
TVP38YKR088C YPL073CP40323 161 aa3.56□□□□□ -1.84
TVP38YKR088C DUO1P53168 247 aaKnown RBP3.56□□□□□ -1.84
TVP38YKR088C YLR112WQ12130 139 aa3.56□□□□□ -1.84
TVP38YKR088C YKR041WP36134 250 aa3.55□□□□□ -1.84
TVP38YKR088C RRT1P38192 103 aa3.55□□□□□ -1.84
TVP38YKR088C YFL051CP43552 160 aa3.55□□□□□ -1.84
TVP38YKR088C YJL027CP47063 138 aaPredicted RBP3.55□□□□□ -1.84
TVP38YKR088C MST27P53176 234 aa3.55□□□□□ -1.84
TVP38YKR088C FCF1Q05498 189 aaPredicted RBP3.55□□□□□ -1.84
TVP38YKR088C YBR126W-AQ8TGU7 68 aa3.55□□□□□ -1.84
TVP38YKR088C PFY1P07274 126 aa3.54□□□□□ -1.84
TVP38YKR088C DAL80P26343 269 aa3.54□□□□□ -1.84
TVP38YKR088C GPI18P38211 433 aa3.54□□□□□ -1.84
TVP38YKR088C YHL037CP38733 133 aa3.54□□□□□ -1.84
TVP38YKR088C YER076CP40049 302 aa3.54□□□□□ -1.84
TVP38YKR088C YIP1P53039 248 aa3.54□□□□□ -1.84
TVP38YKR088C ELC1Q03071 99 aa3.54□□□□□ -1.84
TVP38YKR088C PRM3Q08931 133 aa3.54□□□□□ -1.84
TVP38YKR088C LDB16P25587 256 aa3.53□□□□□ -1.84
TVP38YKR088C YHR140WP38842 239 aa3.53□□□□□ -1.84
TVP38YKR088C CTR2P38865 189 aa3.53□□□□□ -1.84
TVP38YKR088C YEL067CP39978 195 aa3.53□□□□□ -1.84
TVP38YKR088C ABM1P47146 123 aa3.53□□□□□ -1.84
TVP38YKR088C YNL234WP53857 426 aa3.53□□□□□ -1.84
TVP38YKR088C YNL046WP53956 172 aa3.53□□□□□ -1.84
TVP38YKR088C TIM10P87108 93 aa3.53□□□□□ -1.84
TVP38YKR088C SED1Q01589 338 aa3.53□□□□□ -1.84
TVP38YKR088C MSA1Q08471 629 aa3.53□□□□□ -1.84
TVP38YKR088C YKL070WP36087 169 aa3.52□□□□□ -1.85
TVP38YKR088C SNU13P39990 126 aaKnown RBP3.52□□□□□ -1.85
TVP38YKR088C SPI1P40092 148 aa3.52□□□□□ -1.85
TVP38YKR088C YER181CP40097 107 aa3.52□□□□□ -1.85
TVP38YKR088C TOS6P48560 102 aa3.52□□□□□ -1.85
TVP38YKR088C YNR077CP53758 84 aa3.52□□□□□ -1.85
TVP38YKR088C TIM22Q12328 207 aa3.52□□□□□ -1.85
TVP38YKR088C COA3Q3E7B2 85 aa3.52□□□□□ -1.85
TVP38YKR088C GCN1P33892 2672 aaKnown RBP3.52□□□□□ -1.85
TVP38YKR088C YDL022C-AP0C5L6 82 aa3.51□□□□□ -1.85
TVP38YKR088C HMRA2P0CY13 119 aa3.51□□□□□ -1.85
TVP38YKR088C SGN1P40561 250 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
TVP38YKR088C IRC23Q08416 157 aa3.51□□□□□ -1.85
TVP38YKR088C YDL009CQ12210 107 aa3.51□□□□□ -1.85
TVP38YKR088C AGA1P32323 725 aa3.5□□□□□ -1.85
TVP38YKR088C NHP2P32495 156 aaPredicted RBP3.5□□□□□ -1.85
TVP38YKR088C OXA1P39952 402 aa3.5□□□□□ -1.85
TVP38YKR088C OST2P46964 130 aa3.5□□□□□ -1.85
TVP38YKR088C DIA1P54005 336 aa3.5□□□□□ -1.85
TVP38YKR088C UBC7Q02159 165 aa3.5□□□□□ -1.85
TVP38YKR088C YOL160WQ08321 113 aa3.5□□□□□ -1.85
TVP38YKR088C YPL261CQ08976 102 aa3.5□□□□□ -1.85
TVP38YKR088C YOR097CQ12274 175 aaPredicted RBP3.5□□□□□ -1.85
TVP38YKR088C VAR1P02381 398 aa3.49□□□□□ -1.85
TVP38YKR088C IES6P32617 166 aa3.49□□□□□ -1.85
TVP38YKR088C KTI12P34253 313 aaKnown RBP3.49□□□□□ -1.85
TVP38YKR088C MRPL38P35996 138 aaPredicted RBP3.49□□□□□ -1.85
TVP38YKR088C RPL32P38061 130 aaKnown RBP3.49□□□□□ -1.85
TVP38YKR088C ATX1P38636 73 aa3.49□□□□□ -1.85
TVP38YKR088C YNL217WP40152 326 aa3.49□□□□□ -1.85
TVP38YKR088C YFR057WP43625 151 aa3.49□□□□□ -1.85
TVP38YKR088C PBP4Q07362 185 aaKnown RBP3.49□□□□□ -1.85
TVP38YKR088C JID1Q12350 301 aa3.49□□□□□ -1.85
TVP38YKR088C COX10P21592 462 aa3.48□□□□□ -1.85
TVP38YKR088C VTC1P40046 129 aaRIP-Chip data3.48□□□□□ -1.85not detected
TVP38YKR088C LCB3P47013 409 aa3.48□□□□□ -1.85
TVP38YKR088C YGR219WP53307 113 aa3.48□□□□□ -1.85
TVP38YKR088C LSM6Q06406 86 aaKnown RBP3.48□□□□□ -1.85
TVP38YKR088C FCY1Q12178 158 aa3.48□□□□□ -1.85
TVP38YKR088C YCL048W-AQ2V2Q2 79 aa3.48□□□□□ -1.85
TVP38YKR088C ISD11Q6Q560 94 aa3.48□□□□□ -1.85
TVP38YKR088C IGO2Q9P305 131 aa3.48□□□□□ -1.85
TVP38YKR088C INO4P13902 151 aa3.47□□□□□ -1.85
TVP38YKR088C YER121WP40076 114 aa3.47□□□□□ -1.85
TVP38YKR088C POR2P40478 281 aa3.47□□□□□ -1.85
TVP38YKR088C MRPL49P40858 161 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms