RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	KTI12	P34253	313 aa	Known RBP	2.88	□□□□□ -1.95
SOD1	YJR104C	PAU7	P39545	55 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	YNL194C	P40169	301 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	YFR057W	P43625	151 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	SKI6	P46948	246 aa	Predicted RBP	2.88	□□□□□ -1.95
SOD1	YJR104C	RHO5	P53879	331 aa	Known RBP	2.88	□□□□□ -1.95
SOD1	YJR104C	YIL014C-A	Q02598	104 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	YDR209C	Q03480	137 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	LSM6	Q06406	86 aa	Known RBP	2.88	□□□□□ -1.95
SOD1	YJR104C	IRC25	Q07951	179 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	MCH4	Q08268	501 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	MSA1	Q08471	629 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	USV1	Q12132	391 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	FCY1	Q12178	158 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	DAD1	Q12248	94 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	BOL1	Q3E793	110 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	HUG1	Q6Q5K6	68 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	TRP1	P00912	224 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	RPS2	P25443	254 aa	Known RBP	2.87	□□□□□ -1.95
SOD1	YJR104C	YCR050C	P25630	102 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	RFA2	P26754	273 aa	Known RBP	2.87	□□□□□ -1.95
SOD1	YJR104C	GPI18	P38211	433 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	CSH1	P38287	376 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YHR173C	P38864	112 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	MRPL49	P40858	161 aa	Predicted RBP	2.87	□□□□□ -1.95
SOD1	YJR104C	YGR050C	P53231	118 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	HST4	P53688	370 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YDR042C	Q03205	200 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	SDC1	Q03323	175 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YMR103C	Q04436	120 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YLR042C	Q07990	161 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	MIM1	Q08176	113 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	TIM18	Q08749	192 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YPS3	Q12303	508 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YKL183C-A	Q3E765	70 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YCL021W-A	Q96VH3	125 aa		2.87	□□□□□ -1.95
SOD1	YJR104C	YMR316C-A	I2HB70	103 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YLR302C	O13544	120 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	PBI2	P0CT04	75 aa	Known RBP	2.86	□□□□□ -1.95
SOD1	YJR104C	RPL2A	P0CX45	254 aa	Known RBP	2.86	□□□□□ -1.95
SOD1	YJR104C	RPL2B	P0CX46	254 aa	Known RBP	2.86	□□□□□ -1.95
SOD1	YJR104C	YHL018W	P38744	120 aa	Predicted RBP	2.86	□□□□□ -1.95
SOD1	YJR104C	YHR140W	P38842	239 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	SVP26	P38869	228 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	GLE2	P40066	365 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	FHN1	P53279	174 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YGR164W	P53291	111 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YMR320W	Q04897	101 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YOR029W	Q12243	111 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YBR255C-A	Q3E776	120 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YPL038W-A	Q3E7B4	63 aa		2.86	□□□□□ -1.95
SOD1	YJR104C	YHR139C-A	O13536	103 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	Q0255	P03881	472 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	MRPL31	P14063	131 aa	Predicted RBP	2.85	□□□□□ -1.95
SOD1	YJR104C	YMR31	P19955	123 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	HSP12	P22943	109 aa	Known RBP	2.85	□□□□□ -1.95
SOD1	YJR104C	IMP1	P28627	190 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	FZF1	P32805	299 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	SMP1	P38128	452 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	SFT2	P38166	215 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	YNL217W	P40152	326 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	LST8	P41318	303 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	FIP1	P45976	327 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	SHH4	Q06236	168 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	RLM1	Q12224	676 aa		2.85	□□□□□ -1.95
SOD1	YJR104C	BLM10	P43583	2143 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	PIS1	P06197	220 aa	Known RBP	2.84	□□□□□ -1.95
SOD1	YJR104C	RPL20A	P0CX23	172 aa	Known RBP	2.84	□□□□□ -1.95
SOD1	YJR104C	RPL20B	P0CX24	172 aa	Predicted RBP	2.84	□□□□□ -1.95
SOD1	YJR104C	RPB8	P20436	146 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	RPL32	P38061	130 aa	Known RBP	2.84	□□□□□ -1.95
SOD1	YJR104C	YHR180W	P38868	163 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	OST1	P41543	476 aa	Known RBP	2.84	□□□□□ -1.95
SOD1	YJR104C	VPS55	P47111	140 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	MST27	P53176	234 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	GPI19	Q04082	140 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	HNT3	Q08702	217 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	YNL277W-A	Q3E7Z0	62 aa		2.84	□□□□□ -1.95
SOD1	YJR104C	MDM35	O60200	86 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	AQY1	P0CD91	305 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	RPS8A	P0CX39	200 aa	Known RBP	2.83	□□□□□ -1.96
SOD1	YJR104C	RPS8B	P0CX40	200 aa	Known RBP	2.83	□□□□□ -1.96
SOD1	YJR104C	RPS16A	P0CX51	143 aa	Known RBP	2.83	□□□□□ -1.96
SOD1	YJR104C	RPS16B	P0CX52	143 aa	Known RBP	2.83	□□□□□ -1.96
SOD1	YJR104C	ROX3	P25046	220 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	FMP46	P36141	133 aa	Known RBP	2.83	□□□□□ -1.96
SOD1	YJR104C	SFT1	P43682	97 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	NCA3	P46955	337 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	YDR102C	Q03864	110 aa		2.83	□□□□□ -1.96
SOD1	YJR104C	RPL15A	P05748	204 aa	Known RBP	2.82	□□□□□ -1.96
SOD1	YJR104C	CDC39	P25655	2108 aa	Known RBP	2.82	□□□□□ -1.96
SOD1	YJR104C	DSE2	P38844	325 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	RRT13	P40042	185 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.82	□□□□□ -1.96	not detected
SOD1	YJR104C	UBC13	P52490	153 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	MMS2	P53152	137 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	RPL15B	P54780	204 aa	Predicted RBP	2.82	□□□□□ -1.96
SOD1	YJR104C	FIT2	Q08906	153 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	YPL261C	Q08976	102 aa		2.82	□□□□□ -1.96
SOD1	YJR104C	YLR112W	Q12130	139 aa		2.82	□□□□□ -1.96

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