RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C YEL045CP32616 141 aa3.89□□□□□ -1.79
SEC9YGR009C YKR045CP36138 183 aa3.89□□□□□ -1.79
SEC9YGR009C YEL028WP39989 153 aa3.89□□□□□ -1.79
SEC9YGR009C VTC1P40046 129 aaRIP-Chip data3.89□□□□□ -1.79not detected
SEC9YGR009C HUR1P45820 110 aa3.89□□□□□ -1.79
SEC9YGR009C YJL028WP47062 111 aa3.89□□□□□ -1.79
SEC9YGR009C YGL262WP53054 175 aa3.89□□□□□ -1.79
SEC9YGR009C RPL22BP56628 122 aaKnown RBP3.89□□□□□ -1.79
SEC9YGR009C MZM1Q03429 123 aaPredicted RBP3.89□□□□□ -1.79
SEC9YGR009C RPA190P10964 1664 aaKnown RBP3.89□□□□□ -1.79
SEC9YGR009C RPS19AP07280 144 aaKnown RBP3.89□□□□□ -1.79
SEC9YGR009C YFL015CP43578 164 aa3.89□□□□□ -1.79
SEC9YGR009C COX12Q01519 83 aa3.89□□□□□ -1.79
SEC9YGR009C MIM1Q08176 113 aa3.89□□□□□ -1.79
SEC9YGR009C CCH1P50077 2039 aa3.89□□□□□ -1.79
SEC9YGR009C UBR1P19812 1950 aa3.88□□□□□ -1.79
SEC9YGR009C RPS14AP06367 137 aaKnown RBP3.88□□□□□ -1.79
SEC9YGR009C YCR006CP25350 157 aa3.88□□□□□ -1.79
SEC9YGR009C IMP1P28627 190 aa3.88□□□□□ -1.79
SEC9YGR009C HSP10P38910 106 aa3.88□□□□□ -1.79
SEC9YGR009C RPS14BP39516 138 aaKnown RBP3.88□□□□□ -1.79
SEC9YGR009C YAR068WP39564 161 aa3.88□□□□□ -1.79
SEC9YGR009C YMR181CQ03231 154 aa3.88□□□□□ -1.79
SEC9YGR009C ICY1Q04329 127 aa3.88□□□□□ -1.79
SEC9YGR009C YER145C-AA0A023PYF4 145 aa3.87□□□□□ -1.79
SEC9YGR009C RSM18P40033 138 aa3.87□□□□□ -1.79
SEC9YGR009C BOL2P53082 120 aa3.87□□□□□ -1.79
SEC9YGR009C YOR268CQ08734 132 aa3.87□□□□□ -1.79
SEC9YGR009C COX19Q3E731 98 aa3.87□□□□□ -1.79
SEC9YGR009C PDR15Q04182 1529 aaKnown RBP3.87□□□□□ -1.79
SEC9YGR009C MDM35O60200 86 aa3.87□□□□□ -1.79
SEC9YGR009C ATP15P21306 62 aa3.87□□□□□ -1.79
SEC9YGR009C YCR025CP25352 136 aa3.87□□□□□ -1.79
SEC9YGR009C YOR015WQ12169 119 aa3.87□□□□□ -1.79
SEC9YGR009C SMT3Q12306 101 aaKnown RBP3.87□□□□□ -1.79
SEC9YGR009C MYO1P08964 1928 aa3.87□□□□□ -1.79
SEC9YGR009C ICS3P47034 131 aa3.86□□□□□ -1.79
SEC9YGR009C TVP15Q03860 143 aa3.86□□□□□ -1.79
SEC9YGR009C LSM6Q06406 86 aaKnown RBP3.86□□□□□ -1.79
SEC9YGR009C FYV12Q08559 129 aa3.86□□□□□ -1.79
SEC9YGR009C AYT1Q12226 474 aa3.86□□□□□ -1.79
SEC9YGR009C YOR020W-AQ3E824 90 aa3.86□□□□□ -1.79
SEC9YGR009C PAU2P32612 120 aa3.85□□□□□ -1.79
SEC9YGR009C FZF1P32805 299 aa3.85□□□□□ -1.79
SEC9YGR009C YPR011CQ12251 326 aa3.85□□□□□ -1.79
SEC9YGR009C PCL9Q12477 304 aa3.85□□□□□ -1.79
SEC9YGR009C RIF1P29539 1916 aa3.85□□□□□ -1.79
SEC9YGR009C YAR023CD6VPM8 179 aa3.85□□□□□ -1.79
SEC9YGR009C FYV5P25585 152 aa3.85□□□□□ -1.79
SEC9YGR009C MRPL31P14063 131 aaPredicted RBP3.84□□□□□ -1.79
SEC9YGR009C YHP1Q04116 353 aa3.84□□□□□ -1.79
SEC9YGR009C YKL023C-AQ2V2P3 75 aa3.84□□□□□ -1.79
SEC9YGR009C YOR093CQ12275 1648 aa3.84□□□□□ -1.79
SEC9YGR009C YBT1P32386 1661 aa3.84□□□□□ -1.8
SEC9YGR009C AGA1P32323 725 aa3.83□□□□□ -1.8
SEC9YGR009C SDH3P33421 198 aa3.83□□□□□ -1.8
SEC9YGR009C NCA3P46955 337 aa3.83□□□□□ -1.8
SEC9YGR009C PAU12P53343 120 aa3.83□□□□□ -1.8
SEC9YGR009C YDR274CP87283 123 aa3.83□□□□□ -1.8
SEC9YGR009C PIR1Q03178 341 aa3.83□□□□□ -1.8
SEC9YGR009C ATP20Q12233 115 aa3.83□□□□□ -1.8
SEC9YGR009C ECM29P38737 1868 aa3.83□□□□□ -1.8
SEC9YGR009C YLR156WP0CE96 114 aa3.83□□□□□ -1.8
SEC9YGR009C YLR159WP0CE97 114 aa3.83□□□□□ -1.8
SEC9YGR009C YLR161WP0CE98 114 aa3.83□□□□□ -1.8
SEC9YGR009C YER187WP40102 141 aa3.83□□□□□ -1.8
SEC9YGR009C PBA1Q05778 276 aa3.83□□□□□ -1.8
SEC9YGR009C YPL278CQ08990 100 aa3.83□□□□□ -1.8
SEC9YGR009C TIM9O74700 87 aa3.82□□□□□ -1.8
SEC9YGR009C TIM12P32830 109 aa3.82□□□□□ -1.8
SEC9YGR009C QCR10P37299 77 aa3.82□□□□□ -1.8
SEC9YGR009C MTC6P38849 526 aa3.82□□□□□ -1.8
SEC9YGR009C VPS55P47111 140 aa3.82□□□□□ -1.8
SEC9YGR009C RPL26AP05743 127 aaKnown RBP3.82□□□□□ -1.8
SEC9YGR009C TVP23P38962 199 aa3.82□□□□□ -1.8
SEC9YGR009C IGO1P53897 168 aa3.82□□□□□ -1.8
SEC9YGR009C LIP1Q03579 150 aa3.82□□□□□ -1.8
SEC9YGR009C TRS23Q03784 219 aa3.82□□□□□ -1.8
SEC9YGR009C TIM22Q12328 207 aa3.82□□□□□ -1.8
SEC9YGR009C FPR2P32472 135 aa3.81□□□□□ -1.8
SEC9YGR009C PAU24P38155 120 aa3.81□□□□□ -1.8
SEC9YGR009C YEL073CP39974 107 aa3.81□□□□□ -1.8
SEC9YGR009C CIS3P47001 227 aa3.81□□□□□ -1.8
SEC9YGR009C RPL21AQ02753 160 aaKnown RBP3.81□□□□□ -1.8
SEC9YGR009C EMI1Q04406 187 aa3.81□□□□□ -1.8
SEC9YGR009C RPL21BQ12672 160 aaKnown RBP3.81□□□□□ -1.8
SEC9YGR009C PIS1P06197 220 aaKnown RBP3.8□□□□□ -1.8
SEC9YGR009C RNQ1P25367 405 aa3.8□□□□□ -1.8
SEC9YGR009C MSA2P36157 363 aa3.8□□□□□ -1.8
SEC9YGR009C LST8P41318 303 aa3.8□□□□□ -1.8
SEC9YGR009C CRC1Q12289 327 aa3.8□□□□□ -1.8
SEC9YGR009C YHR214C-DP0CX93 97 aa3.8□□□□□ -1.8
SEC9YGR009C ERG2P32352 222 aa3.8□□□□□ -1.8
SEC9YGR009C MRPS8Q03799 155 aa3.8□□□□□ -1.8
SEC9YGR009C YPL261CQ08976 102 aa3.8□□□□□ -1.8
SEC9YGR009C YPL247CQ12523 523 aa3.8□□□□□ -1.8
SEC9YGR009C MHF2Q3E829 80 aa3.8□□□□□ -1.8
SEC9YGR009C YRF1-1P0CX20 1796 aa3.79□□□□□ -1.8
SEC9YGR009C YRF1-5P0CX21 1796 aa3.79□□□□□ -1.8
SEC9YGR009C YRF1-8P0CX22 1796 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 209.6 ms