RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 SMARCB1Q12824 385 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 AAMPQ13685 434 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 SUZ12Q15022 739 aaKnown RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 DBX2Q6ZNG2 339 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 TRMT11Q7Z4G4 463 aaKnown RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 ENGASEQ8NFI3 743 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 SPPL2BQ8TCT7 592 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 SH3RF2Q8TEC5 729 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 C2orf15Q8WU43 125 aaKnown RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 BRF1Q92994 677 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 CYP2S1Q96SQ9 504 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 MRPL4Q9BYD3 311 aaKnown RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 ZCWPW1Q9H0M4 648 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 UXTQ9UBK9 157 aaPredicted RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 PCDHA12Q9UN75 941 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.81
GGA3-212ENST00000582376 FNDC3AQ9Y2H6 1198 aaKnown RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 CITO14578 2027 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 STK36Q9NRP7 1315 aa9.98□□□□□ -0.81
GGA3-212ENST00000582376 COL5A1P20908 1838 aaPredicted RBP9.98□□□□□ -0.81
GGA3-212ENST00000582376 A0A0A0MRY4 1105 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 TADA3O75528 432 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 CYP17A1P05093 508 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 JUPP14923 745 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 TCF3P15923 654 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 HNF1BP35680 557 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 EIF2DP41214 584 aaKnown RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 GRIA2P42262 883 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 TNFRSF4P43489 277 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 SLC6A11P48066 632 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 CCDC173Q0VFZ6 552 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 LY6DQ14210 128 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 PTPRNQ16849 979 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 HLA-BQ31612 363 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 SLC10A6Q3KNW5 377 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 PADI6Q6TGC4 694 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 Q6ZUG5 572 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 FAM177A1Q8N128 213 aaPredicted RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 SLC22A12Q96S37 553 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 ARHGEF4Q9NR80 690 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 ABI2Q9NYB9 513 aaPredicted RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 IL17BQ9UHF5 180 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 BTBD3Q9Y2F9 522 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.97□□□□□ -0.81
GGA3-212ENST00000582376 KNTC1P50748 2209 aa9.97□□□□□ -0.81
GGA3-212ENST00000582376 OBSL1O75147 1896 aa9.96□□□□□ -0.81
GGA3-212ENST00000582376 ARHGEF35A5YM69 484 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 MEI4A8MW99 385 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 DEXIO95424 95 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 CYP3A5P20815 502 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 KDSRQ06136 332 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 MESP2Q0VG99 397 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 RESTQ13127 1097 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 KRT32Q14532 448 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 KCNB1Q14721 858 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 ZC2HC1CQ53FD0 456 aaPredicted RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 MPZL3Q6UWV2 235 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 PRICKLE2Q7Z3G6 844 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 SPACA3Q8IXA5 215 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 ZCCHC9Q8N567 271 aaKnown RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 ZNF513Q8N8E2 541 aaPredicted RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 ARL14EPQ8N8R7 260 aaPredicted RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 STKLD1Q8NE28 680 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 FGF11Q92914 225 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 TMEM176AQ96HP8 235 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 SENP8Q96LD8 212 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 DRC1Q96MC2 740 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 NRSN2Q9GZP1 204 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 UBQLN1Q9UMX0 589 aaKnown RBP9.96□□□□□ -0.82
GGA3-212ENST00000582376 PHLPP2Q6ZVD8 1323 aa9.96□□□□□ -0.82
GGA3-212ENST00000582376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.95□□□□□ -0.82
GGA3-212ENST00000582376 ABLIM1O14639 778 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 HOXB2P14652 356 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 NDUFV2P19404 249 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 PROZP22891 400 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 GPR15P49685 360 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 SPAG1Q07617 926 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 RTP5Q14D33 572 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 DHCR24Q15392 516 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 CALCRLQ16602 461 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 LRRTM3Q86VH5 581 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 C12orf40Q86WS4 652 aa9.95□□□□□ -0.82
GGA3-212ENST00000582376 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms