RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 BICD2Q8TD16 824 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 HOXB13Q92826 284 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 CLIC6Q96NY7 704 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 RNF41Q9H4P4 317 aaPredicted RBP5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 KCND1Q9NSA2 647 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 DACT1Q9NYF0 836 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 PCDHA3Q9Y5H8 950 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 CLIC4Q9Y696 253 aa5.4□□□□□ -1.54
CTNNA1-212ENST00000518919 ANKRD31Q8N7Z5 1873 aa5.4□□□□□ -1.55
CTNNA1-212ENST00000518919 MYH13Q9UKX3 1938 aa5.4□□□□□ -1.55
CTNNA1-212ENST00000518919 ROBO3Q96MS0 1386 aa5.4□□□□□ -1.55
CTNNA1-212ENST00000518919 SNED1Q8TER0 1413 aa5.4□□□□□ -1.55
CTNNA1-212ENST00000518919 DLEC1Q9Y238 1755 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 CCDC69A6NI79 296 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 AP5Z1O43299 807 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ORC4O43929 436 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PRDM1O75626 825 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 CDKL5O76039 1030 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 UFL1O94874 794 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 FSBPO95073 299 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 LETM1O95202 739 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 YEATS4O95619 227 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 WNT11O96014 354 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 NCAM1P13591 858 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 IFNAR1P17181 557 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 SYN1P17600 705 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 TYRP1P17643 537 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 RPL17P18621 184 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ABCB4P21439 1286 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 GUCY1A2P33402 732 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 MC3RP41968 323 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 STT3AP46977 705 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PER3P56645 1201 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 NKX6-1P78426 367 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 CD69Q07108 199 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 RAB39AQ14964 217 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 WTAPQ15007 396 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PDCD2Q16342 344 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 DGKKQ5KSL6 1271 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 KRT40Q6A162 431 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ATL3Q6DD88 541 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 UNC5BQ8IZJ1 945 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 SH2D3CQ8N5H7 860 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PAF1Q8N7H5 531 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 FSIP1Q8NA03 581 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 LINC00301Q8NCQ3 95 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PPP1R14CQ8TAE6 165 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF480Q8WV37 535 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 KIAA1191Q96A73 305 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF396Q96N95 335 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 UHRF1Q96T88 793 aaPredicted RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 SLC26A6Q9BXS9 759 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 OSBPL6Q9BZF3 934 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 CRNKL1Q9BZJ0 848 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 WDR12Q9GZL7 423 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 KIAA1586Q9HCI6 787 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 PNPLA8Q9NP80 782 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 STARD7Q9NQZ5 370 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 AATFQ9NY61 560 aaKnown RBP eCLIP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 FBXO10Q9UK96 956 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 CFAP45Q9UL16 551 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 TNS1Q9HBL0 1735 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 NAV1Q8NEY1 1877 aa5.39□□□□□ -1.55
CTNNA1-212ENST00000518919 BAZ2AQ9UIF9 1905 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 A0A0G2JNJ9 132 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 POM121BA6NF01 834 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 HMGB1P1B2RPK0 211 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 HRKO00198 91 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 N4BP3O15049 544 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 NCK2O43639 380 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PLEKHA8P1O95397 391 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 TYRP14679 529 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 IL1R1P14778 569 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 HNRNPLP14866 589 aaKnown RBP eCLIP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 BRAFP15056 766 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SLC7A1P30825 629 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 VIPR1P32241 457 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PPM1AP35813 382 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SLC6A9P48067 706 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ITGA1P56199 1179 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF543Q08ER8 600 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 BIRC3Q13489 604 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PLS1Q14651 629 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 PTPAQ15257 358 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CAMK4Q16566 473 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 SBK1Q52WX2 424 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 FYB2Q5VWT5 728 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 IZUMO3Q5VZ72 239 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 CIAPIN1Q6FI81 312 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ABHD15Q6UXT9 468 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 GPR155Q7Z3F1 870 aa5.38□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF804AQ7Z570 1209 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms