RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 NDRG1Q92597 394 aaKnown RBP15.67■□□□□ 0.1
PHF3-209ENST00000509330 GPATCH2LQ9NWQ4 482 aa15.67■□□□□ 0.1
PHF3-209ENST00000509330 CNTN3Q9P232 1028 aa15.67■□□□□ 0.1
PHF3-209ENST00000509330 UBQLN1Q9UMX0 589 aaKnown RBP15.67■□□□□ 0.1
PHF3-209ENST00000509330 ST3GAL5Q9UNP4 418 aa15.67■□□□□ 0.1
PHF3-209ENST00000509330 KPNA7A9QM74 516 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 HMGCRP04035 888 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 LCP1P13796 627 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 MIPP30301 263 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ITGA8P53708 1063 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 INHBEP58166 350 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 SLC29A2Q14542 456 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 RXFP2Q8WXD0 754 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 PLEKHA5Q9HAU0 1116 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 NGRNQ9NPE2 291 aaKnown RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 TRPM7Q96QT4 1865 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 H0YGN5 161 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 M0QZ92 97 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ACSL3O95573 720 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ASGR1P07306 291 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 MYZAPP0CAP1 466 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 GNAT1P11488 350 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 PDGFRAP16234 1089 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 THPOP40225 353 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 NRLP54845 237 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 PPP1R2P3Q6NXS1 205 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ALKAL1Q6UXT8 129 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 CD302Q8IX05 232 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 C12orf50Q8NA57 414 aaPredicted RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 RBM41Q96IZ5 413 aaKnown RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 GAD1Q99259 594 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 DDX23Q9BUQ8 820 aaKnown RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 XPNPEP3Q9NQH7 507 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 NFS1Q9Y697 457 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 ATF2P15336 505 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 MAN1A1P33908 653 aa15.66■□□□□ 0.1
PHF3-209ENST00000509330 SLC25A11Q02978 314 aaKnown RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 MTG1Q9BT17 334 aaPredicted RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 GPBP1L1Q9HC44 474 aaPredicted RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
PHF3-209ENST00000509330 CLDN5O00501 218 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 GAS8O95995 478 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 MYCP01106 439 aaPredicted RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 GHRP10912 638 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 TFE3P19532 575 aaPredicted RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 CETN2P41208 172 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 ATXN1P54253 815 aaKnown RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 MRPS6P82932 125 aaKnown RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 LCLAT1Q6UWP7 414 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 RCOR2Q8IZ40 523 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 KCTD6Q8NC69 237 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 ATL2Q8NHH9 583 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 KBTBD7Q8WVZ9 684 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 PEBP4Q96S96 227 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 GTF2IRD1Q9UHL9 959 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 hCG_1818297A0A087WSY0 165 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 PTGESO14684 152 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 GNL1P36915 607 aaPredicted RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 SYCP2LQ5T4T6 812 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 NT5DC4Q86YG4 428 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 CCDC33Q8N5R6 958 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 SLC2A14Q8TDB8 520 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 EPB41L4BQ9H329 900 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 SNX25Q9H3E2 840 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 AGO3Q9H9G7 860 aaKnown RBP15.65■□□□□ 0.1
PHF3-209ENST00000509330 SPC25Q9HBM1 224 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 RNF186Q9NXI6 227 aa15.65■□□□□ 0.1
PHF3-209ENST00000509330 CASTOR2A6NHX0 329 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 I3L4J1 428 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 CST8O60676 142 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 RNF8O76064 485 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 CHRNA1P02708 482 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 CDKN2BP42772 138 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 GUCY1A3Q02108 690 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 KCNA10Q16322 511 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 TFDP3Q5H9I0 405 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 HASPINQ8TF76 798 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 MAGEB5Q9BZ81 275 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 USP18Q9UMW8 372 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 NOVA2Q9UNW9 492 aaKnown RBP15.64■□□□□ 0.09
PHF3-209ENST00000509330 LAMA2P24043 3122 aaKnown RBP15.64■□□□□ 0.09
PHF3-209ENST00000509330 SYNJ2BP-COX16A0A087WUM0 186 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 TP73O15350 636 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 PPFIA2O75334 1257 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 GABBR2O75899 941 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 TJP3O95049 919 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 BYSLQ13895 437 aaKnown RBP15.64■□□□□ 0.09
PHF3-209ENST00000509330 ZNF268Q14587 947 aaPredicted RBP15.64■□□□□ 0.09
PHF3-209ENST00000509330 P3H1Q32P28 736 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 DENND2CQ68D51 928 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 FOXR1Q6PIV2 292 aa15.64■□□□□ 0.09
PHF3-209ENST00000509330 CAPN12Q6ZSI9 719 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms