RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SLC20A1Q8WUM9 679 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 KCNK16Q96T55 309 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SEPT5Q99719 369 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 CLDND1Q9NY35 253 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 H3BQ06 376 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 PRRG1O14668 218 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 THAP12O43422 761 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 TBX10O75333 385 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 FAM163BP0C2L3 166 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SOX5P35711 763 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 LTBRP36941 435 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 MTMR3Q13615 1198 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 KCNC3Q14003 757 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 GOLGA7BQ2TAP0 167 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 SPECC1LQ69YQ0 1117 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 PDE12Q6L8Q7 609 aaKnown RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 DENND1BQ6P3S1 775 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 PDXDC1Q6P996 788 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 TMC5Q6UXY8 1006 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 TTC30AQ86WT1 665 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 CLEC1BQ9P126 229 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 CEP72Q9P209 647 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 FBXW11Q9UKB1 542 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 CNTN6Q9UQ52 1028 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 PCDHB5Q9Y5E4 795 aa9.38□□□□□ -0.91
SCAMP1-202ENST00000506858 PLXNA3P51805 1871 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 F8VP50 259 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 O00370 1275 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 AP1G2O75843 785 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 MICAL2O94851 1124 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 TPM3P06753 285 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 C8AP07357 584 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 HAPLN1P10915 354 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ATF2P15336 505 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 CHRNB2P17787 502 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 GNA15P30679 374 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ELF1P32519 619 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 GRIK1P39086 918 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 STAT1P42224 750 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 RGS7P49802 495 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 MAP3K7CLP57077 242 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 NTHL1P78549 312 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 TWF1Q12792 350 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 IFRD2Q12894 506 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ADAM15Q13444 863 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 SGO2Q562F6 1265 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 RARS2Q5T160 578 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 SYCE2Q6PIF2 218 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ENOSF1Q7L5Y1 443 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 IRF2BP2Q7Z5L9 587 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 FAM35AQ86V20 835 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 DRC7Q8IY82 874 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ZMIZ2Q8NF64 920 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ST13P5Q8NFI4 369 aaPredicted RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 ZNF606Q8WXB4 792 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 NDRG1Q92597 394 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 TNIP3Q96KP6 325 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 SMOQ99835 787 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 KRT82Q9NSB4 513 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 HCFC1R1Q9NWW0 138 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 TSPAN16Q9UKR8 245 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 YIPF1Q9Y548 306 aa9.37□□□□□ -0.91
SCAMP1-202ENST00000506858 CCDC195A0A1B0GUA6 201 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 MMEP08473 750 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 PLEKP08567 350 aaPredicted RBP9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 VDRP11473 427 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 CYP11B1P15538 503 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 ATF6P18850 670 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 KRT9P35527 623 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 PDE4CQ08493 712 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 TBX2Q13207 712 aaPredicted RBP9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 C2CD6Q53TS8 623 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 TPGS2Q68CL5 300 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 GPRIN1Q7Z2K8 1008 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 PHLDB2Q86SQ0 1253 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 GPR65Q8IYL9 337 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 EFHBQ8N7U6 833 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 SCAMP5Q8TAC9 235 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 MRFAP1L1Q96HT8 127 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 FAXDC2Q96IV6 333 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 PCDHB18PQ96TA0 734 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
SCAMP1-202ENST00000506858 CYTH4Q9UIA0 394 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms