RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 AXIN2Q9Y2T1 843 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 GUCA1CO95843 209 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 FAM200BP0CF97 657 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 CCDC15Q0P6D6 951 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 RIN3Q8TB24 985 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 HPDLQ96IR7 371 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 FUT8Q9BYC5 575 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 ADAM33Q9BZ11 813 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 XPO1O14980 1071 aaKnown RBP20.88■□□□□ 0.93
RNF40-203ENST00000493683 TM9SF1O15321 606 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 FCGR1AP12314 374 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 GNL1P36915 607 aaPredicted RBP20.88■□□□□ 0.93
RNF40-203ENST00000493683 FAM151AQ8WW52 585 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 VPS50Q96JG6 964 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 CCDC60Q8IWA6 550 aaPredicted RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 ATP6V0D2Q8N8Y2 350 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 KRCC1Q9NPI7 259 aaPredicted RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.87■□□□□ 0.93
RNF40-203ENST00000493683 LOC100653049A0A140TA62 436 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 KRT34O76011 436 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 PGK2P07205 417 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 RARBP10826 455 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 TCN1P20061 433 aaPredicted RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 C4BPBP20851 252 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 TAF6P49848 677 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 DENND1BQ6P3S1 775 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 NOTUMQ6P988 496 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 TTC30AQ86WT1 665 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 FAM111AQ96PZ2 611 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 GPR63Q9BZJ6 419 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 THAP2Q9H0W7 228 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 CAAP1Q9H8G2 361 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 HEY2Q9UBP5 337 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 PDGFRBP09619 1106 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 RCN1Q15293 331 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 PCSK7Q16549 785 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 USP49Q70CQ1 688 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 IMPAD1Q9NX62 359 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 SDR42E2A6NKP2 422 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 F9P00740 461 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 TGM2P21980 687 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 HARS2P49590 506 aaKnown RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 TRIM16LQ309B1 348 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 ADCK2Q7Z695 626 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 ZFP42Q96MM3 310 aa20.87■□□□□ 0.93
RNF40-203ENST00000493683 TRMT6Q9UJA5 497 aaKnown RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 UBQLN1Q9UMX0 589 aaKnown RBP20.87■□□□□ 0.93
RNF40-203ENST00000493683 TIGD7Q6NT04 549 aaPredicted RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 BNC2Q6ZN30 1099 aaPredicted RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 SCUBE1Q8IWY4 988 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 CAVIN3Q969G5 261 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 H2AFXP16104 143 aaPredicted RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 CHRM3P20309 590 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 SOX6P35712 828 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 KLK7P49862 253 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 TFDP3Q5H9I0 405 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 DDX53Q86TM3 631 aaKnown RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 SLC25A41Q8N5S1 370 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 DRG1Q9Y295 367 aaKnown RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 TARSP26639 723 aaKnown RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 NCKAP1LP55160 1127 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 SH3GL2Q99962 352 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 ADGRA2Q96PE1 1338 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 ATMINO43313 823 aaPredicted RBP20.86■□□□□ 0.93
RNF40-203ENST00000493683 TCF3P15923 654 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 PSMC3P17980 439 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 GARTP22102 1010 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 PON1P27169 355 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 PEX5P50542 639 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 NCALDP61601 193 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 MYBPC2Q14324 1141 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 KCNB2Q92953 911 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 AGBL1Q96MI9 1066 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 SH3GL1Q99961 368 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 CTNNAL1Q9UBT7 734 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 TAGLN3Q9UI15 199 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 SAC3D1A6NKF1 404 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 CTDNEP1O95476 244 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 GHRP10912 638 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 PTPN7P35236 360 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 SLC44A4Q53GD3 710 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 BRD8Q9H0E9 1235 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 LRRC40Q9H9A6 602 aa20.86■□□□□ 0.93
RNF40-203ENST00000493683 NFIBO00712 420 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 CHRNB3Q05901 458 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 GLB1LQ6UWU2 654 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 FAM49BQ9NUQ9 324 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 ALKQ9UM73 1620 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 SERPIND1P05546 499 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 ERFP50548 548 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 CCDC142Q17RM4 750 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 CDC42EP5Q6NZY7 148 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 ZNF512Q96ME7 567 aaPredicted RBP20.85■□□□□ 0.93
RNF40-203ENST00000493683 TRPC7Q9HCX4 862 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 TSC22D4Q9Y3Q8 395 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 CYTH3O43739 400 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 RPS6KA5O75582 802 aa20.85■□□□□ 0.93
RNF40-203ENST00000493683 SCTRP47872 440 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms