RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 SPATA2LQ8IUW3 424 aaPredicted RBP17.36■□□□□ 0.37
SRRT-212ENST00000487311 SCN4BQ8IWT1 228 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 ADGRF2Q8IZF7 708 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 LRRC52Q8N7C0 313 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 GLIS3Q8NEA6 775 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 OR5B17Q8NGF7 314 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 SH3RF2Q8TEC5 729 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
SRRT-212ENST00000487311 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 ITGA11Q9UKX5 1188 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 PTPRJQ12913 1337 aa17.36■□□□□ 0.37
SRRT-212ENST00000487311 MAP1BP46821 2468 aaKnown RBP17.36■□□□□ 0.37
SRRT-212ENST00000487311 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 TRAV19A0A0A6YYK7 116 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 FRMD3A2A2Y4 597 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 VPS37CA5D8V6 355 aaPredicted RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 AKAP3O75969 853 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 LDHAP00338 332 aaKnown RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 IDEP14735 1019 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 LHX1P48742 406 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 USP46P62068 366 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 CEBPZQ03701 1054 aaKnown RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 USP4Q13107 963 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 PSMD2Q13200 908 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 DMC1Q14565 340 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 GAB4Q2WGN9 574 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 FBXO43Q4G163 708 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 CPA6Q8N4T0 437 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 TOP6BLQ8N6T0 577 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 KBTBD7Q8WVZ9 684 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 DDX1Q92499 740 aaKnown RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 LSM14BQ9BX40 385 aaKnown RBP17.35■□□□□ 0.37
SRRT-212ENST00000487311 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 OLFML3Q9NRN5 406 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 NME7Q9Y5B8 376 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 PCDHGA5Q9Y5G8 931 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 ABCA7Q8IZY2 2146 aa17.35■□□□□ 0.37
SRRT-212ENST00000487311 K7EQS6 105 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 CKMP06732 381 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 PDGFRBP09619 1106 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 HDCP19113 662 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 BDNFP23560 247 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 IFNAR2P48551 515 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
SRRT-212ENST00000487311 ATP2A3Q93084 1043 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 HPS3Q969F9 1004 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 RNF38Q9H0F5 515 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 PANK4Q9NVE7 773 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 MYO16Q9Y6X6 1858 aa17.34■□□□□ 0.37
SRRT-212ENST00000487311 KCNK5O95279 499 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 APBB3O95704 486 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 PCSK1P29120 753 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 HOXD13P35453 343 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 OPRD1P41143 372 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 RESTQ13127 1097 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 CUL4AQ13619 759 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 SFTPA1Q8IWL2 248 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 GPD1LQ8N335 351 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 SPATA18Q8TC71 538 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 MYLPFQ96A32 169 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 FUBP3Q96I24 572 aaKnown RBP eCLIP17.33■□□□□ 0.36
SRRT-212ENST00000487311 HPDLQ96IR7 371 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 VPS45Q9NRW7 570 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 MAGEC2Q9UBF1 373 aaPredicted RBP17.33■□□□□ 0.36
SRRT-212ENST00000487311 ANGPTL2Q9UKU9 493 aa17.33■□□□□ 0.36
SRRT-212ENST00000487311 CAVIN2O95810 425 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 CST3P01034 146 aaPredicted RBP17.32■□□□□ 0.36
SRRT-212ENST00000487311 TMEM191BP0C7N4 346 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 TCF3P15923 654 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 MAGEA11P43364 429 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 DGKEP52429 567 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 SEC13P55735 322 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 CREB5Q02930 508 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 MESP2Q0VG99 397 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 C2orf27AQ580R0 203 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 DPH6Q7L8W6 267 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 USP33Q8TEY7 942 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 SYT15Q9BQS2 421 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 CDH9Q9ULB4 789 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 ARHGAP26Q9UNA1 814 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 CHD8Q9HCK8 2581 aa17.32■□□□□ 0.36
SRRT-212ENST00000487311 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
SRRT-212ENST00000487311 LEFTY2O00292 366 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 GIPC1O14908 333 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 HNRNPLP14866 589 aaKnown RBP eCLIP17.31■□□□□ 0.36
SRRT-212ENST00000487311 GRIK1P39086 918 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 SLC6A11P48066 632 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 SHC2P98077 582 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 RNF43Q68DV7 783 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 ADGRG2Q8IZP9 1017 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 CCDC33Q8N5R6 958 aa17.31■□□□□ 0.36
SRRT-212ENST00000487311 PCED1BQ96HM7 432 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms