RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GRIK1P39086 918 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 SLC8A3P57103 927 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CNGA2Q16280 664 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 MEA1Q16626 185 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 SPECC1LQ69YQ0 1117 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 GPR149Q86SP6 731 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 SPATA17Q96L03 361 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 S1PR5Q9H228 398 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 KRT82Q9NSB4 513 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 HESX1Q9UBX0 185 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 O00370 1275 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CYP26A1O43174 497 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 AP1G2O75843 785 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 ADORA2BP29275 332 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 TRIM14Q14142 442 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 PTPN21Q16825 1174 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 ANKRD52Q8NB46 1076 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 DUSP16Q9BY84 665 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 PNPLA8Q9NP80 782 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRPF38B-202ENST00000370022 NPR3P17342 541 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 ATF6P18850 670 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 CLCN1P35523 988 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 CDR1P51861 262 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 DDR2Q16832 855 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 PUS10Q3MIT2 529 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 RARS2Q5T160 578 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 TMC5Q6UXY8 1006 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 VSTM4Q8IW00 320 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 SCN4BQ8IWT1 228 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 LEMD2Q8NC56 503 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF397Q8NF99 534 aaPredicted RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF606Q8WXB4 792 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 TFAP2BQ92481 460 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 PSMG2Q969U7 264 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 ZNF707Q96C28 371 aaPredicted RBP16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 MRFAP1L1Q96HT8 127 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 RIPOR3Q96MK2 946 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 UBXN6Q9BZV1 441 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
PRPF38B-202ENST00000370022 F8VP50 259 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 H3BQ06 376 aaPredicted RBP16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 CCL16O15467 120 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 AP5Z1O43299 807 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 THAP12O43422 761 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 SOAT2O75908 522 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 PNMA6AP0CW24 399 aaPredicted RBP16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 CSH1P0DML2 217 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 CSH2P0DML3 217 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 BRD2P25440 801 aaKnown RBP16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 PDE6CP51160 858 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 BCAT1P54687 386 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 SMAD4Q13485 552 aaKnown RBP16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 GOLGA7BQ2TAP0 167 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 CLEC20AQ6ZU45 233 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 SLC47A2Q86VL8 602 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 BAP1Q92560 729 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 NECTIN4Q96NY8 510 aa16.45■□□□□ 0.22
PRPF38B-202ENST00000370022 GFPT2O94808 682 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 SETSIPP0DME0 302 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 CYP11B1P15538 503 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 FERP16591 822 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 PTPN2P17706 415 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 MTHFRP42898 656 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 BST2Q10589 180 aaKnown RBP16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 TAF12Q16514 161 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 AAK1Q2M2I8 961 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 SMOQ99835 787 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 COMMD8Q9NX08 183 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 FAM50BQ9Y247 325 aa16.44■□□□□ 0.22
PRPF38B-202ENST00000370022 PTPRDP23468 1912 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 FGF19O95750 216 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 TPM1P09493 284 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 GPR15P49685 360 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 ZNF75DP51815 510 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 MAP3K7CLP57077 242 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 ZBED6P86452 979 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 PKDCCQ504Y2 493 aa16.43■□□□□ 0.22
PRPF38B-202ENST00000370022 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms