RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PLIN4Q96Q06 1357 aa14.99□□□□□ -0.01
TMEM47-201ENST00000275954 SSTR1P30872 391 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 SULT1E1P49888 294 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 EPHB1P54762 984 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PTK7Q13308 1070 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 TRIM42Q8IWZ5 723 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 EXD1Q8NHP7 514 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 N4BP2L2Q92802 583 aaPredicted RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 NEUROG2Q9H2A3 272 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PIH1D1Q9NWS0 290 aaKnown RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PCDHA2Q9Y5H9 948 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 FSTL1Q12841 308 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 ACVR2BQ13705 512 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 THOC5Q13769 683 aaKnown RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 CCNG2Q16589 344 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 WDR49Q8IV35 697 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 WDR75Q8IWA0 830 aaKnown RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 DNERQ8NFT8 737 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 RAB3IL1Q8TBN0 382 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 LRRN4Q8WUT4 740 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 TNIP3Q96KP6 325 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 BFARQ9NZS9 450 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 AFG3L2Q9Y4W6 797 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 B4GALT5O43286 388 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 DIAPH2O60879 1101 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 PECAM1P16284 738 aaPredicted RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 ZNF200P98182 395 aaPredicted RBP14.98□□□□□ -0.01
TMEM47-201ENST00000275954 ATG16L1Q676U5 607 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 FBXO36Q8NEA4 188 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 CLEC4DQ8WXI8 215 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 SERPINB12Q96P63 405 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 XPNPEP3Q9NQH7 507 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 ZFATQ9P243 1243 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 HES2Q9Y543 173 aa14.98□□□□□ -0.01
TMEM47-201ENST00000275954 GHRP10912 638 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 AKAP5P24588 427 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CAPSQ13938 189 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 PLCB4Q15147 1175 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 ZACNQ401N2 412 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 EEF1DP3Q658K8 133 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 BRSK2Q8IWQ3 736 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CCNYL1Q8N7R7 359 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 TINF2Q9BSI4 451 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 FAM167BQ9BTA0 163 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CEP41Q9BYV8 373 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 NUP98P52948 1817 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 COL18A1P39060 1754 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CCL23P55773 120 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 KDSRQ06136 332 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 RNF135Q8IUD6 432 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CDKL3Q8IVW4 592 aaPredicted RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 WHRNQ9P202 907 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 DDX20Q9UHI6 824 aaKnown RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 USP18Q9UMW8 372 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 LCA5LO95447 670 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 HSPA4LO95757 839 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 RFC1P35251 1148 aaPredicted RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 HOXD13P35453 343 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 NDST1P52848 882 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SCUBE3Q8IX30 993 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CCDC124Q96CT7 223 aaKnown RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 ZNF560Q96MR9 790 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 TEPSINQ96N21 525 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SLC40A1Q9NP59 571 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 HNRNPH1P31943 449 aaKnown RBP14.97□□□□□ -0.01
TMEM47-201ENST00000275954 REPS2Q8NFH8 660 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 FAM172AQ8WUF8 416 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SGSM3Q96HU1 749 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 CCDC68Q9H2F9 335 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SIX2Q9NPC8 291 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 SNTG2Q9NY99 539 aa14.97□□□□□ -0.01
TMEM47-201ENST00000275954 LACTBL1A8MY62 500 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 TRIM49D1C9J1S8 452 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 AGPSO00116 658 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 TGFB3P10600 412 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 GNAT1P11488 350 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 CPA2P48052 419 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
TMEM47-201ENST00000275954 MMEL1Q495T6 779 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 PPIL6Q8IXY8 311 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 SAMD3Q8N6K7 520 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 FAM111AQ96PZ2 611 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 TIMM13Q9Y5L4 95 aaPredicted RBP14.96□□□□□ -0.01
TMEM47-201ENST00000275954 CNTNAP1P78357 1384 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 CES2O00748 559 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 TAS2R40P59535 323 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 FOXR2Q6PJQ5 311 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 SLC7A14Q8TBB6 771 aa14.96□□□□□ -0.01
TMEM47-201ENST00000275954 TMEM176AQ96HP8 235 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms