RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W RRT7Q07829 113 aa1.92□□□□□ -2.1
UBP15YMR304W SUS1Q6WNK7 96 aa1.92□□□□□ -2.1
UBP15YMR304W RFA2P26754 273 aaKnown RBP1.92□□□□□ -2.1
UBP15YMR304W TPC1P53257 314 aa1.92□□□□□ -2.1
UBP15YMR304W PCP1P53259 346 aa1.92□□□□□ -2.1
UBP15YMR304W YPL039WQ03080 316 aa1.92□□□□□ -2.1
UBP15YMR304W YDR042CQ03205 200 aa1.92□□□□□ -2.1
UBP15YMR304W FCF2Q12035 217 aaPredicted RBP1.92□□□□□ -2.1
UBP15YMR304W POL2P21951 2222 aaKnown RBP1.92□□□□□ -2.1
UBP15YMR304W FMP49A0A023PZB3 126 aa1.92□□□□□ -2.1
UBP15YMR304W ECM12O13529 151 aa1.92□□□□□ -2.1
UBP15YMR304W ANB1P19211 157 aa1.92□□□□□ -2.1
UBP15YMR304W REC104P33323 182 aa1.92□□□□□ -2.1
UBP15YMR304W SWD2P36104 329 aaPredicted RBP1.92□□□□□ -2.1
UBP15YMR304W MTC6P38849 526 aa1.92□□□□□ -2.1
UBP15YMR304W ELP6Q04868 273 aa1.92□□□□□ -2.1
UBP15YMR304W NCE102Q12207 173 aaRIP-Chip data1.92□□□□□ -2.1not detected
UBP15YMR304W HFA1P32874 2273 aa1.91□□□□□ -2.1
UBP15YMR304W TPI1P00942 248 aaKnown RBP1.91□□□□□ -2.1
UBP15YMR304W IRC22P40006 225 aa1.91□□□□□ -2.1
UBP15YMR304W YER134CP40081 178 aa1.91□□□□□ -2.1
UBP15YMR304W ATG18P43601 500 aa1.91□□□□□ -2.1
UBP15YMR304W MRX11Q03079 207 aa1.91□□□□□ -2.1
UBP15YMR304W CSI2Q08054 341 aa1.91□□□□□ -2.1
UBP15YMR304W SOD1P00445 154 aaKnown RBP1.91□□□□□ -2.1
UBP15YMR304W YFR057WP43625 151 aa1.91□□□□□ -2.1
UBP15YMR304W XPT1P47165 209 aa1.91□□□□□ -2.1
UBP15YMR304W EFM6P53970 246 aa1.91□□□□□ -2.1
UBP15YMR304W YLR162WQ06235 118 aa1.91□□□□□ -2.1
UBP15YMR304W RFM1Q12192 310 aa1.91□□□□□ -2.1
UBP15YMR304W PEX22P39718 180 aa1.9□□□□□ -2.1
UBP15YMR304W YPS3Q12303 508 aa1.9□□□□□ -2.1
UBP15YMR304W COX13P32799 129 aa1.9□□□□□ -2.11
UBP15YMR304W SDH3P33421 198 aa1.9□□□□□ -2.11
UBP15YMR304W YKR045CP36138 183 aa1.9□□□□□ -2.11
UBP15YMR304W CTF8P38877 133 aa1.9□□□□□ -2.11
UBP15YMR304W YNL200CP40165 246 aaKnown RBP1.9□□□□□ -2.11
UBP15YMR304W TIS11P47977 285 aa1.9□□□□□ -2.11
UBP15YMR304W GLO1P50107 326 aa1.9□□□□□ -2.11
UBP15YMR304W YGL262WP53054 175 aa1.9□□□□□ -2.11
UBP15YMR304W YLR152CP54072 576 aa1.9□□□□□ -2.11
UBP15YMR304W TRI1Q05024 226 aa1.9□□□□□ -2.11
UBP15YMR304W NAT3Q06504 195 aa1.9□□□□□ -2.11
UBP15YMR304W SWM1Q12379 170 aa1.9□□□□□ -2.11
UBP15YMR304W ADH1P00330 348 aaKnown RBP1.9□□□□□ -2.11
UBP15YMR304W YPT10P38146 199 aa1.9□□□□□ -2.11
UBP15YMR304W SNO3P43544 222 aa1.9□□□□□ -2.11
UBP15YMR304W TDA4P47153 279 aa1.9□□□□□ -2.11
UBP15YMR304W VPS71Q03433 280 aa1.9□□□□□ -2.11
UBP15YMR304W COA2Q3E823 68 aa1.9□□□□□ -2.11
UBP15YMR304W MRS4P23500 304 aa1.89□□□□□ -2.11
UBP15YMR304W PAU2P32612 120 aa1.89□□□□□ -2.11
UBP15YMR304W FSH2Q05015 223 aa1.89□□□□□ -2.11
UBP15YMR304W RPS22BQ3E7Y3 130 aaKnown RBP1.89□□□□□ -2.11
UBP15YMR304W PBI2P0CT04 75 aaKnown RBP1.89□□□□□ -2.11
UBP15YMR304W QRI5P32344 111 aa1.89□□□□□ -2.11
UBP15YMR304W ECM34P38728 170 aa1.89□□□□□ -2.11
UBP15YMR304W HPA3P39979 161 aa1.89□□□□□ -2.11
UBP15YMR304W PGA1P53896 198 aa1.89□□□□□ -2.11
UBP15YMR304W YLR112WQ12130 139 aa1.89□□□□□ -2.11
UBP15YMR304W YAL065CO13511 128 aa1.89□□□□□ -2.11
UBP15YMR304W URA5P13298 226 aaKnown RBP1.89□□□□□ -2.11
UBP15YMR304W SPO13P23624 291 aa1.89□□□□□ -2.11
UBP15YMR304W TOA2P32774 122 aa1.89□□□□□ -2.11
UBP15YMR304W SPT4P32914 102 aaPredicted RBP1.89□□□□□ -2.11
UBP15YMR304W YEA4P40004 342 aa1.89□□□□□ -2.11
UBP15YMR304W AYT1Q12226 474 aa1.89□□□□□ -2.11
UBP15YMR304W NBL1Q3E7Y6 73 aa1.89□□□□□ -2.11
UBP15YMR304W MHF2Q3E829 80 aa1.89□□□□□ -2.11
UBP15YMR304W YGR035W-AQ45U48 73 aa1.89□□□□□ -2.11
UBP15YMR304W MEC1P38111 2368 aa1.89□□□□□ -2.11
UBP15YMR304W HEM4P06174 275 aa1.88□□□□□ -2.11
UBP15YMR304W MIX23P38162 196 aa1.88□□□□□ -2.11
UBP15YMR304W RPP1P38786 293 aa1.88□□□□□ -2.11
UBP15YMR304W EMC5P40540 141 aa1.88□□□□□ -2.11
UBP15YMR304W YNR077CP53758 84 aa1.88□□□□□ -2.11
UBP15YMR304W YDL180WQ12301 547 aa1.88□□□□□ -2.11
UBP15YMR304W MRS3P10566 314 aa1.88□□□□□ -2.11
UBP15YMR304W SHE1P38200 338 aa1.88□□□□□ -2.11
UBP15YMR304W GPI18P38211 433 aa1.88□□□□□ -2.11
UBP15YMR304W CSH1P38287 376 aa1.88□□□□□ -2.11
UBP15YMR304W GGC1P38988 300 aa1.88□□□□□ -2.11
UBP15YMR304W OST1P41543 476 aaKnown RBP1.88□□□□□ -2.11
UBP15YMR304W YFL015CP43578 164 aa1.88□□□□□ -2.11
UBP15YMR304W DSK2P48510 373 aa1.88□□□□□ -2.11
UBP15YMR304W TOS8P53147 276 aa1.88□□□□□ -2.11
UBP15YMR304W LPP1Q04396 274 aa1.88□□□□□ -2.11
UBP15YMR304W IRC23Q08416 157 aa1.88□□□□□ -2.11
UBP15YMR304W YLR363W-AQ3E747 85 aa1.88□□□□□ -2.11
UBP15YMR304W TAD3Q9URQ3 322 aa1.88□□□□□ -2.11
UBP15YMR304W ARF2P19146 181 aaKnown RBP1.88□□□□□ -2.11
UBP15YMR304W YCR100CP25606 316 aa1.88□□□□□ -2.11
UBP15YMR304W MGT1P26188 188 aa1.88□□□□□ -2.11
UBP15YMR304W BAT2P47176 376 aaKnown RBP1.88□□□□□ -2.11
UBP15YMR304W UBC13P52490 153 aa1.88□□□□□ -2.11
UBP15YMR304W HAL1Q01766 294 aa1.88□□□□□ -2.11
UBP15YMR304W SNT309Q06091 175 aaPredicted RBP1.88□□□□□ -2.11
UBP15YMR304W YKL044WP36092 106 aa1.87□□□□□ -2.11
UBP15YMR304W YFR045WP43617 309 aa1.87□□□□□ -2.11
UBP15YMR304W PAU4P53427 120 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms