RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W YJR096WP47137 282 aa4.31□□□□□ -1.72
SPG4YMR107W LEE1Q02799 301 aaKnown RBP4.31□□□□□ -1.72
SPG4YMR107W YML079WQ03629 201 aa4.31□□□□□ -1.72
SPG4YMR107W RDL2Q08742 149 aaKnown RBP4.31□□□□□ -1.72
SPG4YMR107W YLR361C-AQ3E795 98 aa4.31□□□□□ -1.72
SPG4YMR107W RPS2P25443 254 aaKnown RBP4.3□□□□□ -1.72
SPG4YMR107W MRPS5P33759 307 aa4.3□□□□□ -1.72
SPG4YMR107W RPS26AP39938 119 aaKnown RBP4.3□□□□□ -1.72
SPG4YMR107W YCH1P42937 148 aa4.3□□□□□ -1.72
SPG4YMR107W LCL3P53153 274 aa4.3□□□□□ -1.72
SPG4YMR107W YGR018CP53211 109 aa4.3□□□□□ -1.72
SPG4YMR107W CRZ1P53968 678 aa4.3□□□□□ -1.72
SPG4YMR107W YMR254CQ04838 102 aa4.3□□□□□ -1.72
SPG4YMR107W USB1Q12208 290 aaKnown RBP4.3□□□□□ -1.72
SPG4YMR107W CDC39P25655 2108 aaKnown RBP4.3□□□□□ -1.72
SPG4YMR107W ACC1Q00955 2233 aaKnown RBP4.29□□□□□ -1.72
SPG4YMR107W PIS1P06197 220 aaKnown RBP4.29□□□□□ -1.72
SPG4YMR107W RPL27BP0C2H7 136 aaKnown RBP4.29□□□□□ -1.72
SPG4YMR107W YCR022CP25620 114 aa4.29□□□□□ -1.72
SPG4YMR107W UGX2P32772 223 aa4.29□□□□□ -1.72
SPG4YMR107W YHR130CP38834 111 aa4.29□□□□□ -1.72
SPG4YMR107W YJL193WP39542 402 aa4.29□□□□□ -1.72
SPG4YMR107W MST28P39552 234 aa4.29□□□□□ -1.72
SPG4YMR107W GLE2P40066 365 aa4.29□□□□□ -1.72
SPG4YMR107W SHR5P41912 237 aa4.29□□□□□ -1.72
SPG4YMR107W YJL118WP47022 219 aa4.29□□□□□ -1.72
SPG4YMR107W YIP3P53633 176 aa4.29□□□□□ -1.72
SPG4YMR107W ATG21Q02887 496 aa4.29□□□□□ -1.72
SPG4YMR107W IRC25Q07951 179 aa4.29□□□□□ -1.72
SPG4YMR107W YDR119W-AQ2V2P9 66 aa4.29□□□□□ -1.72
SPG4YMR107W STF1P01098 86 aa4.28□□□□□ -1.72
SPG4YMR107W RPL35AP0CX84 120 aaKnown RBP4.28□□□□□ -1.72
SPG4YMR107W RPL35BP0CX85 120 aaKnown RBP4.28□□□□□ -1.72
SPG4YMR107W ATX1P38636 73 aa4.28□□□□□ -1.72
SPG4YMR107W DOG2P38773 246 aa4.28□□□□□ -1.72
SPG4YMR107W SEC72P39742 193 aaKnown RBP4.28□□□□□ -1.72
SPG4YMR107W PCL7P40186 285 aa4.28□□□□□ -1.72
SPG4YMR107W YFL015CP43578 164 aa4.28□□□□□ -1.72
SPG4YMR107W MGR2Q02889 113 aa4.28□□□□□ -1.72
SPG4YMR107W MIX14Q04341 121 aa4.28□□□□□ -1.72
SPG4YMR107W RAF1Q06891 181 aa4.28□□□□□ -1.72
SPG4YMR107W HNT3Q08702 217 aa4.28□□□□□ -1.72
SPG4YMR107W FCY1Q12178 158 aa4.28□□□□□ -1.72
SPG4YMR107W YAL063C-AQ3E791 96 aa4.28□□□□□ -1.72
SPG4YMR107W RPS16AP0CX51 143 aaKnown RBP4.27□□□□□ -1.73
SPG4YMR107W RPS16BP0CX52 143 aaKnown RBP4.27□□□□□ -1.73
SPG4YMR107W TOA2P32774 122 aa4.27□□□□□ -1.73
SPG4YMR107W YIL086CP40503 102 aa4.27□□□□□ -1.73
SPG4YMR107W ECO1P43605 281 aa4.27□□□□□ -1.73
SPG4YMR107W PGU1P47180 361 aa4.27□□□□□ -1.73
SPG4YMR107W UBC13P52490 153 aa4.27□□□□□ -1.73
SPG4YMR107W YMR103CQ04436 120 aa4.27□□□□□ -1.73
SPG4YMR107W OPI10Q08202 246 aa4.27□□□□□ -1.73
SPG4YMR107W SEC16P48415 2195 aaKnown RBP4.26□□□□□ -1.73
SPG4YMR107W AGA1P32323 725 aa4.26□□□□□ -1.73
SPG4YMR107W VTC1P40046 129 aaRIP-Chip data4.26□□□□□ -1.73not detected
SPG4YMR107W YMR141CP40211 102 aa4.26□□□□□ -1.73
SPG4YMR107W HST4P53688 370 aa4.26□□□□□ -1.73
SPG4YMR107W HSK3P69852 69 aa4.26□□□□□ -1.73
SPG4YMR107W SNP1Q00916 300 aaPredicted RBP4.26□□□□□ -1.73
SPG4YMR107W NUP53Q03790 475 aa4.26□□□□□ -1.73
SPG4YMR107W FCF1Q05498 189 aaPredicted RBP4.26□□□□□ -1.73
SPG4YMR107W UPS1Q05776 175 aa4.26□□□□□ -1.73
SPG4YMR107W YOR097CQ12274 175 aaPredicted RBP4.26□□□□□ -1.73
SPG4YMR107W Q0255P03881 472 aa4.25□□□□□ -1.73
SPG4YMR107W AQY1P0CD91 305 aa4.25□□□□□ -1.73
SPG4YMR107W APS1P35181 156 aa4.25□□□□□ -1.73
SPG4YMR107W MTC6P38849 526 aa4.25□□□□□ -1.73
SPG4YMR107W YFR057WP43625 151 aa4.25□□□□□ -1.73
SPG4YMR107W CIS3P47001 227 aa4.25□□□□□ -1.73
SPG4YMR107W COX12Q01519 83 aa4.25□□□□□ -1.73
SPG4YMR107W RFM1Q12192 310 aa4.25□□□□□ -1.73
SPG4YMR107W YBL112CQ3E7Y4 105 aa4.25□□□□□ -1.73
SPG4YMR107W BRR2P32639 2163 aaKnown RBP4.24□□□□□ -1.73
SPG4YMR107W VAR1P02381 398 aa4.24□□□□□ -1.73
SPG4YMR107W RPL7AP05737 244 aaKnown RBP4.24□□□□□ -1.73
SPG4YMR107W YHR213WP0CI67 198 aa4.24□□□□□ -1.73
SPG4YMR107W HSP12P22943 109 aaKnown RBP4.24□□□□□ -1.73
SPG4YMR107W NHP2P32495 156 aaPredicted RBP4.24□□□□□ -1.73
SPG4YMR107W RPA12P32529 125 aaKnown RBP4.24□□□□□ -1.73
SPG4YMR107W YKR045CP36138 183 aa4.24□□□□□ -1.73
SPG4YMR107W MIC12P38341 106 aa4.24□□□□□ -1.73
SPG4YMR107W PAU7P39545 55 aa4.24□□□□□ -1.73
SPG4YMR107W YIL029CP40538 142 aa4.24□□□□□ -1.73
SPG4YMR107W GTO3Q04806 366 aa4.24□□□□□ -1.73
SPG4YMR107W YMR317WQ04893 1140 aa4.24□□□□□ -1.73
SPG4YMR107W MRPL23Q12487 163 aaPredicted RBP4.24□□□□□ -1.73
SPG4YMR107W COA3Q3E7B2 85 aa4.24□□□□□ -1.73
SPG4YMR107W FAS1P07149 2051 aaKnown RBP4.23□□□□□ -1.73
SPG4YMR107W YCR006CP25350 157 aa4.23□□□□□ -1.73
SPG4YMR107W SPC29P33419 253 aa4.23□□□□□ -1.73
SPG4YMR107W MID2P36027 376 aa4.23□□□□□ -1.73
SPG4YMR107W YKL070WP36087 169 aa4.23□□□□□ -1.73
SPG4YMR107W MED6P38782 295 aa4.23□□□□□ -1.73
SPG4YMR107W YER076CP40049 302 aa4.23□□□□□ -1.73
SPG4YMR107W YER181CP40097 107 aa4.23□□□□□ -1.73
SPG4YMR107W BLM10P43583 2143 aa4.23□□□□□ -1.73
SPG4YMR107W IMP2P46972 177 aa4.23□□□□□ -1.73
SPG4YMR107W YFL041W-AQ3E817 63 aa4.23□□□□□ -1.73
SPG4YMR107W HTL1Q9URQ5 78 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms