RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C VMA10P48836 114 aaKnown RBP1.64□□□□□ -2.15
VPS9YML097C YGL230CP53074 147 aa1.64□□□□□ -2.15
VPS9YML097C MPC1P53157 130 aaKnown RBP1.64□□□□□ -2.15
VPS9YML097C AIM11P87275 137 aa1.64□□□□□ -2.15
VPS9YML097C WIP1Q2V2P8 89 aa1.64□□□□□ -2.15
VPS9YML097C YIR021W-AQ3E739 70 aa1.64□□□□□ -2.15
VPS9YML097C YLR099W-AQ3E798 87 aa1.64□□□□□ -2.15
VPS9YML097C AQY2P0CD90 149 aa1.63□□□□□ -2.15
VPS9YML097C DCV1P43595 202 aa1.63□□□□□ -2.15
VPS9YML097C NAT5Q08689 176 aa1.63□□□□□ -2.15
VPS9YML097C MRPL15P36523 253 aa1.62□□□□□ -2.15
VPS9YML097C YBR027CP38220 110 aa1.62□□□□□ -2.15
VPS9YML097C SED1Q01589 338 aa1.62□□□□□ -2.15
VPS9YML097C AIM36Q03798 255 aa1.61□□□□□ -2.15
VPS9YML097C NMT1P14743 455 aa1.6□□□□□ -2.15
VPS9YML097C FUN14P18411 198 aa1.6□□□□□ -2.15
VPS9YML097C YHL037CP38733 133 aa1.6□□□□□ -2.15
VPS9YML097C APS2Q00381 147 aa1.6□□□□□ -2.15
VPS9YML097C PAU21P0CE86 164 aa1.59□□□□□ -2.15
VPS9YML097C PAU22P0CE87 164 aa1.59□□□□□ -2.15
VPS9YML097C UGX2P32772 223 aa1.59□□□□□ -2.15
VPS9YML097C SAE3P89114 91 aa1.59□□□□□ -2.15
VPS9YML097C YPL067CQ02754 198 aa1.59□□□□□ -2.15
VPS9YML097C RPL33AP05744 107 aaKnown RBP1.59□□□□□ -2.16
VPS9YML097C SRL3P36167 246 aa1.59□□□□□ -2.16
VPS9YML097C YPR203WQ08994 102 aa1.59□□□□□ -2.16
VPS9YML097C RIF1P29539 1916 aa1.58□□□□□ -2.16
VPS9YML097C ACC1Q00955 2233 aaKnown RBP1.58□□□□□ -2.16
VPS9YML097C YGL014C-AP0C5N1 53 aa1.58□□□□□ -2.16
VPS9YML097C ANB1P19211 157 aa1.58□□□□□ -2.16
VPS9YML097C YOR376W-AQ3E805 51 aa1.58□□□□□ -2.16
VPS9YML097C MDS3P53094 1487 aa1.57□□□□□ -2.16
VPS9YML097C TRM732Q03496 1420 aa1.57□□□□□ -2.16
VPS9YML097C RTC6O14464 93 aa1.57□□□□□ -2.16
VPS9YML097C YHR213WP0CI67 198 aa1.57□□□□□ -2.16
VPS9YML097C LST8P41318 303 aa1.57□□□□□ -2.16
VPS9YML097C YGL149WP53116 101 aa1.57□□□□□ -2.16
VPS9YML097C YLR296WQ05898 108 aa1.57□□□□□ -2.16
VPS9YML097C GTT2Q12390 233 aa1.57□□□□□ -2.16
VPS9YML097C VAR1P02381 398 aa1.56□□□□□ -2.16
VPS9YML097C HSP10P38910 106 aa1.56□□□□□ -2.16
VPS9YML097C ARL3Q02804 198 aa1.56□□□□□ -2.16
VPS9YML097C LDB18Q07887 179 aa1.56□□□□□ -2.16
VPS9YML097C YOR097CQ12274 175 aaPredicted RBP1.56□□□□□ -2.16
VPS9YML097C MHF1Q3E835 90 aa1.56□□□□□ -2.16
VPS9YML097C KTI11Q3E840 82 aa1.56□□□□□ -2.16
VPS9YML097C MON2P48563 1636 aaPredicted RBP1.56□□□□□ -2.16
VPS9YML097C RPL40AP0CH08 128 aaKnown RBP1.55□□□□□ -2.16
VPS9YML097C RPL40BP0CH09 128 aaKnown RBP1.55□□□□□ -2.16
VPS9YML097C YKL044WP36092 106 aa1.55□□□□□ -2.16
VPS9YML097C MRPL11P36521 249 aaPredicted RBP1.55□□□□□ -2.16
VPS9YML097C RPB11P38902 120 aa1.55□□□□□ -2.16
VPS9YML097C YAR064WP39563 99 aa1.55□□□□□ -2.16
VPS9YML097C ERV14P53173 138 aa1.55□□□□□ -2.16
VPS9YML097C YMR122CQ03879 124 aa1.55□□□□□ -2.16
VPS9YML097C HAP3P13434 144 aa1.54□□□□□ -2.16
VPS9YML097C SEC59P20048 519 aa1.54□□□□□ -2.16
VPS9YML097C ATG8P38182 117 aaRIP-Chip data1.54□□□□□ -2.16not detected
VPS9YML097C YFR035CP43608 114 aa1.54□□□□□ -2.16
VPS9YML097C SPP41P38904 1435 aa1.53□□□□□ -2.16
VPS9YML097C YOR304C-AO14468 76 aa1.53□□□□□ -2.16
VPS9YML097C YCR099CP25657 155 aa1.53□□□□□ -2.16
VPS9YML097C HUA1P40325 198 aa1.53□□□□□ -2.16
VPS9YML097C YNL122CP53921 115 aaPredicted RBP1.53□□□□□ -2.16
VPS9YML097C SEN15Q04675 128 aa1.53□□□□□ -2.16
VPS9YML097C PFY1P07274 126 aa1.52□□□□□ -2.17
VPS9YML097C YJL197C-AP0C5P0 93 aa1.52□□□□□ -2.17
VPS9YML097C YER039C-AP0CD97 72 aa1.51□□□□□ -2.17
VPS9YML097C AIM18P38884 321 aa1.51□□□□□ -2.17
VPS9YML097C GPI19Q04082 140 aa1.51□□□□□ -2.17
VPS9YML097C YLR042CQ07990 161 aa1.51□□□□□ -2.17
VPS9YML097C PRM3Q08931 133 aa1.51□□□□□ -2.17
VPS9YML097C ADK1P07170 222 aaKnown RBP1.5□□□□□ -2.17
VPS9YML097C EMP24P32803 203 aaKnown RBP1.5□□□□□ -2.17
VPS9YML097C GSP1P32835 219 aaKnown RBP1.5□□□□□ -2.17
VPS9YML097C SNF11P38956 169 aa1.5□□□□□ -2.17
VPS9YML097C YAR029WP39549 74 aa1.5□□□□□ -2.17
VPS9YML097C RUB1Q03919 77 aa1.5□□□□□ -2.17
VPS9YML097C BEM2P39960 2167 aaKnown RBP1.49□□□□□ -2.17
VPS9YML097C UTP11P34247 250 aaPredicted RBP1.49□□□□□ -2.17
VPS9YML097C COA4Q05809 96 aa1.49□□□□□ -2.17
VPS9YML097C FCF2Q12035 217 aaPredicted RBP1.49□□□□□ -2.17
VPS9YML097C RPL36BO14455 100 aaKnown RBP1.48□□□□□ -2.17
VPS9YML097C RPL36AP05745 100 aaPredicted RBP1.48□□□□□ -2.17
VPS9YML097C YJL009WP47078 108 aa1.48□□□□□ -2.17
VPS9YML097C YMR007WQ03675 126 aa1.48□□□□□ -2.17
VPS9YML097C IRC21Q04772 201 aa1.48□□□□□ -2.17
VPS9YML097C SNT2P53127 1403 aa1.48□□□□□ -2.17
VPS9YML097C HAP2P06774 265 aa1.47□□□□□ -2.17
VPS9YML097C YCR001WP25347 104 aa1.47□□□□□ -2.17
VPS9YML097C AIM4P38305 123 aaPredicted RBP1.47□□□□□ -2.17
VPS9YML097C PAM16P42949 149 aa1.47□□□□□ -2.17
VPS9YML097C CCW12Q12127 133 aa1.47□□□□□ -2.17
VPS9YML097C YIL102CP40488 101 aa1.47□□□□□ -2.17
VPS9YML097C RTR2Q12378 196 aa1.47□□□□□ -2.17
VPS9YML097C YOL013W-AP0C272 63 aaPredicted RBP1.46□□□□□ -2.18
VPS9YML097C YER187WP40102 141 aa1.46□□□□□ -2.18
VPS9YML097C YGR164WP53291 111 aa1.46□□□□□ -2.18
VPS9YML097C YLR194CQ05777 254 aa1.46□□□□□ -2.18
VPS9YML097C YPL261CQ08976 102 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms