RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W CDC33P07260 213 aaKnown RBP-0.33□□□□□ -2.46
PRP39YML046W ERD2P18414 219 aa-0.33□□□□□ -2.46
PRP39YML046W UBC8P28263 218 aa-0.33□□□□□ -2.46
PRP39YML046W SMI1P32566 505 aa-0.33□□□□□ -2.46
PRP39YML046W RPC25P35718 212 aa-0.33□□□□□ -2.46
PRP39YML046W AIM2P39721 246 aa-0.33□□□□□ -2.46
PRP39YML046W TMA23Q03525 211 aa-0.33□□□□□ -2.46
PRP39YML046W HRD1Q08109 551 aa-0.33□□□□□ -2.46
PRP39YML046W YER039C-AP0CD97 72 aa-0.34□□□□□ -2.46
PRP39YML046W SEC11P15367 167 aa-0.34□□□□□ -2.46
PRP39YML046W CSH1P38287 376 aa-0.34□□□□□ -2.46
PRP39YML046W YBR242WP38331 238 aa-0.34□□□□□ -2.46
PRP39YML046W IPT1P38954 527 aa-0.34□□□□□ -2.46
PRP39YML046W HPA3P39979 161 aa-0.34□□□□□ -2.46
PRP39YML046W ERG28P40030 148 aa-0.34□□□□□ -2.46
PRP39YML046W YMR141CP40211 102 aa-0.34□□□□□ -2.46
PRP39YML046W PAM16P42949 149 aa-0.34□□□□□ -2.46
PRP39YML046W VOA1P53262 265 aa-0.34□□□□□ -2.46
PRP39YML046W YMR099CQ03161 297 aaKnown RBP-0.34□□□□□ -2.46
PRP39YML046W YDR476CQ03362 224 aa-0.34□□□□□ -2.46
PRP39YML046W BNA7Q04066 261 aa-0.34□□□□□ -2.46
PRP39YML046W SEN15Q04675 128 aa-0.34□□□□□ -2.46
PRP39YML046W YHR007C-AQ07074 71 aa-0.34□□□□□ -2.46
PRP39YML046W RRT8Q08219 342 aa-0.34□□□□□ -2.46
PRP39YML046W DAS2Q12084 232 aa-0.34□□□□□ -2.46
PRP39YML046W RUD3Q12234 484 aaKnown RBP-0.34□□□□□ -2.46
PRP39YML046W MPD1Q12404 318 aaKnown RBP-0.34□□□□□ -2.46
PRP39YML046W SNF8Q12483 233 aa-0.34□□□□□ -2.46
PRP39YML046W YFR032C-BQ8TGU2 87 aa-0.34□□□□□ -2.46
PRP39YML046W YPK2P18961 677 aa-0.35□□□□□ -2.46
PRP39YML046W CSM1P25651 190 aa-0.35□□□□□ -2.46
PRP39YML046W YBR209WP38311 105 aa-0.35□□□□□ -2.46
PRP39YML046W YBR285WP38354 144 aa-0.35□□□□□ -2.46
PRP39YML046W GOS1P38736 223 aa-0.35□□□□□ -2.46
PRP39YML046W DOG2P38773 246 aa-0.35□□□□□ -2.46
PRP39YML046W CWP2P43497 92 aa-0.35□□□□□ -2.46
PRP39YML046W RMR1P53060 241 aa-0.35□□□□□ -2.46
PRP39YML046W ERV41Q04651 352 aa-0.35□□□□□ -2.46
PRP39YML046W YPL257WQ08974 193 aa-0.35□□□□□ -2.46
PRP39YML046W YGR121W-AQ3E816 71 aa-0.35□□□□□ -2.46
PRP39YML046W YOS1Q3E834 85 aa-0.35□□□□□ -2.46
PRP39YML046W YCL012CQ8J0M4 134 aa-0.35□□□□□ -2.46
PRP39YML046W YLR236CA0A023PZG4 107 aa-0.35□□□□□ -2.47
PRP39YML046W THP2O13539 261 aaKnown RBP-0.35□□□□□ -2.47
PRP39YML046W HTB1P02293 131 aaKnown RBP-0.35□□□□□ -2.47
PRP39YML046W TRX1P22217 103 aaKnown RBP-0.35□□□□□ -2.47
PRP39YML046W SEC17P32602 292 aa-0.35□□□□□ -2.47
PRP39YML046W YET1P35723 206 aa-0.35□□□□□ -2.47
PRP39YML046W YHR173CP38864 112 aa-0.35□□□□□ -2.47
PRP39YML046W YAR068WP39564 161 aa-0.35□□□□□ -2.47
PRP39YML046W YAL064WP39711 94 aa-0.35□□□□□ -2.47
PRP39YML046W HSK3P69852 69 aa-0.35□□□□□ -2.47
PRP39YML046W NHP10Q03435 203 aa-0.35□□□□□ -2.47
PRP39YML046W THI74Q04083 370 aa-0.35□□□□□ -2.47
PRP39YML046W CUE4Q04201 117 aaPredicted RBP-0.35□□□□□ -2.47
PRP39YML046W GAL83Q04739 417 aa-0.35□□□□□ -2.47
PRP39YML046W ELP6Q04868 273 aa-0.35□□□□□ -2.47
PRP39YML046W SHH4Q06236 168 aa-0.35□□□□□ -2.47
PRP39YML046W RAD28Q12021 506 aa-0.35□□□□□ -2.47
PRP39YML046W FSF1Q12029 327 aaKnown RBP-0.35□□□□□ -2.47
PRP39YML046W YNL042W-BQ3E7Z2 85 aa-0.35□□□□□ -2.47
PRP39YML046W RPL25P04456 142 aaKnown RBP-0.36□□□□□ -2.47
PRP39YML046W HAP3P13434 144 aa-0.36□□□□□ -2.47
PRP39YML046W SPS18P32572 300 aa-0.36□□□□□ -2.47
PRP39YML046W UMP1P38293 148 aa-0.36□□□□□ -2.47
PRP39YML046W YPL073CP40323 161 aa-0.36□□□□□ -2.47
PRP39YML046W YRB1P41920 201 aaKnown RBP-0.36□□□□□ -2.47
PRP39YML046W SER2P42941 309 aa-0.36□□□□□ -2.47
PRP39YML046W HHT1P61830 136 aa-0.36□□□□□ -2.47
PRP39YML046W YMR226CQ05016 267 aaKnown RBP-0.36□□□□□ -2.47
PRP39YML046W BCP1Q06338 283 aa-0.36□□□□□ -2.47
PRP39YML046W NOC4Q06512 552 aaPredicted RBP-0.36□□□□□ -2.47
PRP39YML046W YOR034C-AQ3E735 80 aa-0.36□□□□□ -2.47
PRP39YML046W HTL1Q9URQ5 78 aa-0.36□□□□□ -2.47
PRP39YML046W Q0032Q9ZZX7 96 aa-0.36□□□□□ -2.47
PRP39YML046W RPL28P02406 149 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W UTP11P34247 250 aaPredicted RBP-0.37□□□□□ -2.47
PRP39YML046W SHE2P36068 246 aaKnown RBP RIP-Chip data-0.37□□□□□ -2.47not detected
PRP39YML046W MRPL28P36527 147 aa-0.37□□□□□ -2.47
PRP39YML046W RRT1P38192 103 aa-0.37□□□□□ -2.47
PRP39YML046W YPT31P38555 223 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W YIL163CP40448 117 aa-0.37□□□□□ -2.47
PRP39YML046W YGL193CP53097 103 aa-0.37□□□□□ -2.47
PRP39YML046W MGR2Q02889 113 aa-0.37□□□□□ -2.47
PRP39YML046W KEI1Q06346 221 aa-0.37□□□□□ -2.47
PRP39YML046W YET3Q07451 203 aa-0.37□□□□□ -2.47
PRP39YML046W DGA1Q08650 418 aa-0.37□□□□□ -2.47
PRP39YML046W YMR122W-AQ3E842 84 aa-0.37□□□□□ -2.47
PRP39YML046W COX8P04039 78 aa-0.37□□□□□ -2.47
PRP39YML046W CDC10P25342 322 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W HOM6P31116 359 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W VMA6P32366 345 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W TIM12P32830 109 aa-0.37□□□□□ -2.47
PRP39YML046W RIB7P33312 244 aa-0.37□□□□□ -2.47
PRP39YML046W SNC2P33328 115 aa-0.37□□□□□ -2.47
PRP39YML046W YKR070WP36151 352 aaKnown RBP-0.37□□□□□ -2.47
PRP39YML046W MRPL17P36528 281 aa-0.37□□□□□ -2.47
PRP39YML046W YCR087C-AP37263 153 aa-0.37□□□□□ -2.47
PRP39YML046W YHR140WP38842 239 aa-0.37□□□□□ -2.47
PRP39YML046W CCS1P40202 249 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms