RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C ADK1P07170 222 aaKnown RBP1.17□□□□□ -2.22
ATG38YLR211C RPB11P38902 120 aa1.17□□□□□ -2.22
ATG38YLR211C RPL13BP40212 199 aaKnown RBP1.17□□□□□ -2.22
ATG38YLR211C DCV1P43595 202 aa1.17□□□□□ -2.22
ATG38YLR211C BRP1P53194 125 aa1.17□□□□□ -2.22
ATG38YLR211C CWC27Q02770 301 aa1.17□□□□□ -2.22
ATG38YLR211C GPI11Q06636 219 aa1.17□□□□□ -2.22
ATG38YLR211C YOR097CQ12274 175 aaPredicted RBP1.17□□□□□ -2.22
ATG38YLR211C RPL13AQ12690 199 aaPredicted RBP1.17□□□□□ -2.22
ATG38YLR211C KTI11Q3E840 82 aa1.17□□□□□ -2.22
ATG38YLR211C MDS3P53094 1487 aa1.17□□□□□ -2.22
ATG38YLR211C SNT2P53127 1403 aa1.16□□□□□ -2.22
ATG38YLR211C MRPL44P19956 98 aa1.16□□□□□ -2.22
ATG38YLR211C YGL010WP25338 174 aa1.16□□□□□ -2.22
ATG38YLR211C LHP1P33399 275 aaKnown RBP1.16□□□□□ -2.22
ATG38YLR211C ECM31P38122 312 aa1.16□□□□□ -2.22
ATG38YLR211C YFR035CP43608 114 aa1.16□□□□□ -2.22
ATG38YLR211C YAE1P47118 141 aaPredicted RBP1.16□□□□□ -2.22
ATG38YLR211C MPC1P53157 130 aaKnown RBP1.16□□□□□ -2.22
ATG38YLR211C YLR042CQ07990 161 aa1.16□□□□□ -2.22
ATG38YLR211C GTT2Q12390 233 aa1.16□□□□□ -2.22
ATG38YLR211C COA3Q3E7B2 85 aa1.16□□□□□ -2.22
ATG38YLR211C ACC1Q00955 2233 aaKnown RBP1.16□□□□□ -2.22
ATG38YLR211C YFL051CP43552 160 aa1.15□□□□□ -2.23
ATG38YLR211C YGL230CP53074 147 aa1.15□□□□□ -2.23
ATG38YLR211C NAT5Q08689 176 aa1.15□□□□□ -2.23
ATG38YLR211C CYR1P08678 2026 aaKnown RBP1.15□□□□□ -2.23
ATG38YLR211C SPP41P38904 1435 aa1.15□□□□□ -2.23
ATG38YLR211C RTC6O14464 93 aa1.14□□□□□ -2.23
ATG38YLR211C PAU21P0CE86 164 aa1.14□□□□□ -2.23
ATG38YLR211C PAU22P0CE87 164 aa1.14□□□□□ -2.23
ATG38YLR211C NMT1P14743 455 aa1.14□□□□□ -2.23
ATG38YLR211C FUN14P18411 198 aa1.14□□□□□ -2.23
ATG38YLR211C CDC39P25655 2108 aaKnown RBP1.14□□□□□ -2.23
ATG38YLR211C YCR099CP25657 155 aa1.14□□□□□ -2.23
ATG38YLR211C YAR029WP39549 74 aa1.14□□□□□ -2.23
ATG38YLR211C SEC59P20048 519 aa1.13□□□□□ -2.23
ATG38YLR211C PRE1P22141 198 aaKnown RBP1.13□□□□□ -2.23
ATG38YLR211C YKL044WP36092 106 aa1.13□□□□□ -2.23
ATG38YLR211C YBR027CP38220 110 aa1.13□□□□□ -2.23
ATG38YLR211C RGI1P40043 161 aaPredicted RBP1.13□□□□□ -2.23
ATG38YLR211C YFL065CP43539 102 aa1.13□□□□□ -2.23
ATG38YLR211C YPL067CQ02754 198 aa1.13□□□□□ -2.23
ATG38YLR211C FCF2Q12035 217 aaPredicted RBP1.13□□□□□ -2.23
ATG38YLR211C ANB1P19211 157 aa1.12□□□□□ -2.23
ATG38YLR211C HYP2P23301 157 aaKnown RBP1.12□□□□□ -2.23
ATG38YLR211C EMP24P32803 203 aaKnown RBP1.12□□□□□ -2.23
ATG38YLR211C HSP10P38910 106 aa1.12□□□□□ -2.23
ATG38YLR211C SNF11P38956 169 aa1.12□□□□□ -2.23
ATG38YLR211C PAM16P42949 149 aa1.12□□□□□ -2.23
ATG38YLR211C YGL149WP53116 101 aa1.12□□□□□ -2.23
ATG38YLR211C ERV14P53173 138 aa1.12□□□□□ -2.23
ATG38YLR211C SED1Q01589 338 aa1.12□□□□□ -2.23
ATG38YLR211C GPI19Q04082 140 aa1.12□□□□□ -2.23
ATG38YLR211C FIT1Q04433 528 aa1.12□□□□□ -2.23
ATG38YLR211C TSC11P40061 1430 aa1.12□□□□□ -2.23
ATG38YLR211C RPL40AP0CH08 128 aaKnown RBP1.11□□□□□ -2.23
ATG38YLR211C RPL40BP0CH09 128 aaKnown RBP1.11□□□□□ -2.23
ATG38YLR211C YHR212W-AP0CX91 67 aa1.11□□□□□ -2.23
ATG38YLR211C HAP3P13434 144 aa1.11□□□□□ -2.23
ATG38YLR211C YCR101CP25607 182 aa1.11□□□□□ -2.23
ATG38YLR211C YBR242WP38331 238 aa1.11□□□□□ -2.23
ATG38YLR211C AIM18P38884 321 aa1.11□□□□□ -2.23
ATG38YLR211C LST8P41318 303 aa1.11□□□□□ -2.23
ATG38YLR211C RPS12P48589 143 aaKnown RBP1.11□□□□□ -2.23
ATG38YLR211C YGR164WP53291 111 aa1.11□□□□□ -2.23
ATG38YLR211C YLR296WQ05898 108 aa1.11□□□□□ -2.23
ATG38YLR211C VAM10Q08474 114 aa1.11□□□□□ -2.23
ATG38YLR211C TRM732Q03496 1420 aa1.1□□□□□ -2.23
ATG38YLR211C YGL014C-AP0C5N1 53 aa1.1□□□□□ -2.23
ATG38YLR211C YJL197C-AP0C5P0 93 aa1.1□□□□□ -2.23
ATG38YLR211C AQY2P0CD90 149 aa1.1□□□□□ -2.23
ATG38YLR211C YHR213WP0CI67 198 aa1.1□□□□□ -2.23
ATG38YLR211C UTP11P34247 250 aaPredicted RBP1.1□□□□□ -2.23
ATG38YLR211C MRPL11P36521 249 aaPredicted RBP1.1□□□□□ -2.23
ATG38YLR211C RTR2Q12378 196 aa1.1□□□□□ -2.23
ATG38YLR211C OCA6Q12454 224 aa1.1□□□□□ -2.23
ATG38YLR211C MHF1Q3E835 90 aa1.1□□□□□ -2.23
ATG38YLR211C RIF1P29539 1916 aa1.1□□□□□ -2.23
ATG38YLR211C TOP2P06786 1428 aaKnown RBP1.09□□□□□ -2.23
ATG38YLR211C VAR1P02381 398 aa1.09□□□□□ -2.23
ATG38YLR211C RPL33AP05744 107 aaKnown RBP1.09□□□□□ -2.23
ATG38YLR211C HAP2P06774 265 aa1.09□□□□□ -2.23
ATG38YLR211C UBC5P15732 148 aa1.09□□□□□ -2.23
ATG38YLR211C MRPL15P36523 253 aa1.09□□□□□ -2.23
ATG38YLR211C ATG8P38182 117 aaRIP-Chip data1.09□□□□□ -2.23not detected
ATG38YLR211C YHL037CP38733 133 aa1.09□□□□□ -2.23
ATG38YLR211C PAU12P53343 120 aa1.09□□□□□ -2.23
ATG38YLR211C YPR203WQ08994 102 aa1.09□□□□□ -2.23
ATG38YLR211C FYV7Q12247 151 aa1.09□□□□□ -2.23
ATG38YLR211C BUD4P47136 1447 aa1.08□□□□□ -2.24
ATG38YLR211C YBR090CP38253 122 aa1.08□□□□□ -2.24
ATG38YLR211C YHR130CP38834 111 aa1.08□□□□□ -2.24
ATG38YLR211C YEA6P39953 335 aa1.08□□□□□ -2.24
ATG38YLR211C TDA2P40045 126 aa1.08□□□□□ -2.24
ATG38YLR211C YER187WP40102 141 aa1.08□□□□□ -2.24
ATG38YLR211C GNA1P43577 159 aaPredicted RBP1.08□□□□□ -2.24
ATG38YLR211C YMR122CQ03879 124 aa1.08□□□□□ -2.24
ATG38YLR211C PRM3Q08931 133 aa1.08□□□□□ -2.24
ATG38YLR211C YOR289WQ12012 251 aaPredicted RBP1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms