RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	YPR127W	Q06494	345 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	FEX1	Q08913	375 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	FEX2	Q08991	375 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	YBL112C	Q3E7Y4	105 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	RPS1A	P33442	255 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	YKR070W	P36151	352 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	CTR2	P38865	189 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	SMB1	P40018	196 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	YJR111C	P47148	283 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	RSM19	P53733	91 aa	Predicted RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	YMR114C	Q04471	368 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	JIP3	O13555	125 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	MAK31	P23059	88 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	TOM40	P23644	387 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	SMD3	P43321	101 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	LSM1	P47017	172 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	XPT1	P47165	209 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	TOS8	P53147	276 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	YPR013C	Q12145	317 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	YLR050C	Q12155	161 aa	Known RBP	0.49	□□□□□ -2.33
PRP16	YKR086W	YCL012C	Q8J0M4	134 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	YFR032C-B	Q8TGU2	87 aa		0.49	□□□□□ -2.33
PRP16	YKR086W	POG1	P40473	351 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	IRC23	Q08416	157 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	MSA1	Q08471	629 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	NIP7	Q08962	181 aa	Known RBP	0.48	□□□□□ -2.33
PRP16	YKR086W	YPL247C	Q12523	523 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	YLR462W	O13556	202 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	RPL2A	P0CX45	254 aa	Known RBP	0.48	□□□□□ -2.33
PRP16	YKR086W	RPL2B	P0CX46	254 aa	Known RBP	0.48	□□□□□ -2.33
PRP16	YKR086W	NHP2	P32495	156 aa	Predicted RBP	0.48	□□□□□ -2.33
PRP16	YKR086W	FZF1	P32805	299 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	SRY1	P36007	326 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	MPC2	P38857	129 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	YEL075C	P39972	122 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	PIR5	P46999	287 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	YMR007W	Q03675	126 aa		0.48	□□□□□ -2.33
PRP16	YKR086W	YPR010C-A	A5Z2X5	72 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	RPS1B	P23248	255 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	SNF11	P38956	169 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	APS3	P47064	194 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	YIP3	P53633	176 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	LSM3	P57743	89 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	MIX14	Q04341	121 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	COA3	Q3E7B2	85 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	HYM1	P32464	399 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	NUF2	P33895	451 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	UMP1	P38293	148 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	YJR146W	P47174	117 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	LSM7	P53905	115 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	CGI121	Q03705	181 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	NSL1	Q12143	216 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	MHF1	Q3E835	90 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	COA6	Q3E846	104 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	CDC7	P06243	507 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	RFA3	P26755	122 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	RPS20	P38701	121 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	AIM18	P38884	321 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	NSA2	P40078	261 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	YLR460C	P54007	376 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	SED1	Q01589	338 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	YDR249C	Q03787	373 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	COQ10	Q08058	207 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	FIT2	Q08906	153 aa		0.47	□□□□□ -2.33
PRP16	YKR086W	YOR283W	Q12040	230 aa	Known RBP	0.47	□□□□□ -2.33
PRP16	YKR086W	YBR013C	P38215	129 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YBR090C	P38253	122 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	CCS1	P40202	249 aa	Known RBP	0.46	□□□□□ -2.34
PRP16	YKR086W	GAT4	P40569	121 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YIR020C	P40575	100 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	FIP1	P45976	327 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	MCM22	P47167	239 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YGL101W	P53144	215 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YGR017W	P53210	297 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	NRK1	P53915	240 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	DML1	Q03652	475 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	LCL2	Q08045	131 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YCR099C	P25657	155 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	NTF2	P33331	125 aa	Known RBP	0.46	□□□□□ -2.34
PRP16	YKR086W	UPS2	P35200	230 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YKL075C	P36083	450 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	COS6	P53344	381 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	GAL83	Q04739	417 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	YPD1	Q07688	167 aa		0.46	□□□□□ -2.34
PRP16	YKR086W	INO4	P13902	151 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	RPL30	P14120	105 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	YHR022C	P38763	256 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YEL073C	P39974	107 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	SER2	P42941	309 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YGR025W	P53216	100 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	HPT1	Q04178	221 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	FIT1	Q04433	528 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	NAT3	Q06504	195 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	PRM3	Q08931	133 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	ATG40	Q99325	256 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	POR1	P04840	283 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	MRP49	P32388	137 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	AUA1	P32450	94 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	APQ12	P40532	138 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YOR268C	Q08734	132 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms