RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A YKR070WP36151 352 aaKnown RBP0.7□□□□□ -2.3
YHL009W-AYHL009W-A MRPL15P36523 253 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A YBR242WP38331 238 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A YAL064WP39711 94 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A GAT4P40569 121 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A YFL065CP43539 102 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A BRP1P53194 125 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A SAE3P89114 91 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A SED1Q01589 338 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A TVP18Q04767 167 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A WIP1Q2V2P8 89 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A YLR099W-AQ3E798 87 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A CMC4Q3E7A9 73 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A SPP41P38904 1435 aa0.7□□□□□ -2.3
YHL009W-AYHL009W-A VAR1P02381 398 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A RPL33AP05744 107 aaKnown RBP0.69□□□□□ -2.3
YHL009W-AYHL009W-A PAU21P0CE86 164 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A PAU22P0CE87 164 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A HAP3P13434 144 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A QCR10P37299 77 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A YBR027CP38220 110 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A YFL051CP43552 160 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A YPL067CQ02754 198 aa0.69□□□□□ -2.3
YHL009W-AYHL009W-A CYR1P08678 2026 aaKnown RBP0.69□□□□□ -2.3
YHL009W-AYHL009W-A RIF1P29539 1916 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A NMT1P14743 455 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A FUN14P18411 198 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A TRS20P38334 175 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A HSP10P38910 106 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A YAR064WP39563 99 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A DCV1P43595 202 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A YGL149WP53116 101 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A ERV14P53173 138 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A ARL3Q02804 198 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A YLR296WQ05898 108 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A FCF2Q12035 217 aaPredicted RBP0.68□□□□□ -2.3
YHL009W-AYHL009W-A MHF1Q3E835 90 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A KTI11Q3E840 82 aa0.68□□□□□ -2.3
YHL009W-AYHL009W-A ACC1Q00955 2233 aaKnown RBP0.67□□□□□ -2.3
YHL009W-AYHL009W-A PFY1P07274 126 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YGL014C-AP0C5N1 53 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YHR213WP0CI67 198 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A GSP1P32835 219 aaKnown RBP0.67□□□□□ -2.3
YHL009W-AYHL009W-A YKL044WP36092 106 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A MRPL11P36521 249 aaPredicted RBP0.67□□□□□ -2.3
YHL009W-AYHL009W-A YHL037CP38733 133 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A RPB11P38902 120 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YIL102CP40488 101 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YJL009WP47078 108 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YMR007WQ03675 126 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A AIM36Q03798 255 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A GPI19Q04082 140 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A IRC21Q04772 201 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A LDB18Q07887 179 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YOR072WQ08486 104 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A YOR097CQ12274 175 aaPredicted RBP0.67□□□□□ -2.3
YHL009W-AYHL009W-A GTT2Q12390 233 aa0.67□□□□□ -2.3
YHL009W-AYHL009W-A RTC6O14464 93 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A YOR304C-AO14468 76 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A HAP2P06774 265 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A AQY2P0CD90 149 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A SEC59P20048 519 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A YCR099CP25657 155 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A ATG8P38182 117 aaRIP-Chip data0.66□□□□□ -2.3not detected
YHL009W-AYHL009W-A RUB1Q03919 77 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A SEN15Q04675 128 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A YPR203WQ08994 102 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A RTR2Q12378 196 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A YPK9Q12697 1472 aa0.66□□□□□ -2.3
YHL009W-AYHL009W-A SNT2P53127 1403 aa0.65□□□□□ -2.3
YHL009W-AYHL009W-A RPL36BO14455 100 aaKnown RBP0.65□□□□□ -2.31
YHL009W-AYHL009W-A RPL36AP05745 100 aaPredicted RBP0.65□□□□□ -2.31
YHL009W-AYHL009W-A YJL197C-AP0C5P0 93 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A UGX2P32772 223 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A UTP11P34247 250 aaPredicted RBP0.65□□□□□ -2.31
YHL009W-AYHL009W-A TDA2P40045 126 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A LST8P41318 303 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A YFR035CP43608 114 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A YNL122CP53921 115 aaPredicted RBP0.65□□□□□ -2.31
YHL009W-AYHL009W-A YMR122CQ03879 124 aa0.65□□□□□ -2.31
YHL009W-AYHL009W-A ADK1P07170 222 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A RPS22AP0C0W1 130 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A RPL40AP0CH08 128 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A RPL40BP0CH09 128 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A AIM18P38884 321 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A SNF11P38956 169 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A YAR029WP39549 74 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A RGI1P40043 161 aaPredicted RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A HUA1P40325 198 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A RPS12P48589 143 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A YIL014C-AQ02598 104 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A HPA2Q06592 156 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A YLR042CQ07990 161 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A PRM3Q08931 133 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A CCW12Q12127 133 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A RPS22BQ3E7Y3 130 aaKnown RBP0.64□□□□□ -2.31
YHL009W-AYHL009W-A YOR376W-AQ3E805 51 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A COA6Q3E846 104 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A MED11Q99278 115 aa0.64□□□□□ -2.31
YHL009W-AYHL009W-A TSC11P40061 1430 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms