RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	ADK1	P07170	222 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	DDR48	P18899	430 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	CKS1	P20486	150 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	BUD23	P25627	275 aa	Predicted RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	NTG1	P31378	399 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	HYM1	P32464	399 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	CPR5	P35176	225 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YBR032W	P38223	100 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YHL042W	P38729	150 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	SNU13	P39990	126 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	YNL200C	P40165	246 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	HUA1	P40325	198 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YJL218W	P40892	196 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	IRC18	P47056	224 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YGL101W	P53144	215 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	PDR17	P53844	350 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	NRK1	P53915	240 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	CWC27	Q02770	301 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	NMA1	Q06178	401 aa	Known RBP	0.74	□□□□□ -2.29
SHE9	YDR393W	HUT1	Q12520	339 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YOR011W-A	Q3E807	68 aa		0.74	□□□□□ -2.29
SHE9	YDR393W	YER188C-A	P0C0V2	99 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	OCH1	P31755	480 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	VMA22	P38784	181 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	DLS1	P40366	167 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	TDA4	P47153	279 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	COG5	P53951	403 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	SGF11	Q03067	99 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	FIT1	Q04433	528 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	GAL83	Q04739	417 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	ATG38	Q05789	226 aa	Known RBP	0.73	□□□□□ -2.29
SHE9	YDR393W	YOR289W	Q12012	251 aa	Predicted RBP	0.73	□□□□□ -2.29
SHE9	YDR393W	YDR010C	Q12426	110 aa		0.73	□□□□□ -2.29
SHE9	YDR393W	HTB1	P02293	131 aa	Known RBP	0.72	□□□□□ -2.29
SHE9	YDR393W	SEC4	P07560	215 aa	Known RBP	0.72	□□□□□ -2.29
SHE9	YDR393W	RPL27A	P0C2H6	136 aa	Known RBP	0.72	□□□□□ -2.29
SHE9	YDR393W	NHP6B	P11633	99 aa	Known RBP	0.72	□□□□□ -2.29
SHE9	YDR393W	ATP15	P21306	62 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	YPT31	P38555	223 aa	Known RBP	0.72	□□□□□ -2.29
SHE9	YDR393W	PAM16	P42949	149 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	YFL065C	P43539	102 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	DYN3	Q04949	312 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	GPI11	Q06636	219 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	RRT15	Q3E811	62 aa		0.72	□□□□□ -2.29
SHE9	YDR393W	MAG1	P22134	296 aa	Known RBP	0.71	□□□□□ -2.3
SHE9	YDR393W	YBL010C	P32788	280 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	TRM5	P38793	499 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YNL194C	P40169	301 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YPL073C	P40323	161 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	RFC2	P40348	353 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	MGA1	P53050	456 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	LSM7	P53905	115 aa	Known RBP	0.71	□□□□□ -2.3
SHE9	YDR393W	YNL033W	P53964	284 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YNL019C	P53975	284 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	ELP6	Q04868	273 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YMR315W	Q04869	349 aa	Known RBP	0.71	□□□□□ -2.3
SHE9	YDR393W	GGA1	Q06336	557 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	NOC4	Q06512	552 aa	Predicted RBP	0.71	□□□□□ -2.3
SHE9	YDR393W	YPD1	Q07688	167 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	VAM10	Q08474	114 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YKL183C-A	Q3E765	70 aa		0.71	□□□□□ -2.3
SHE9	YDR393W	YDR034C-A	P0C289	58 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	ASF2	P32448	525 aa	Predicted RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	RTC3	P38804	111 aa	Predicted RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	ERG28	P40030	148 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	CCS1	P40202	249 aa	Known RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	LST8	P41318	303 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	TOM7	P53507	60 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	YMR099C	Q03161	297 aa	Known RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	HNT1	Q04344	158 aa	Known RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	YMR252C	Q04814	134 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	NSL1	Q12143	216 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	PST2	Q12335	198 aa	Known RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	DGK1	Q12382	290 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	SPO13	P23624	291 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	RPB7	P34087	171 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	TRS20	P38334	175 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	IKI1	P38874	309 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	OTU1	P43558	301 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	GNA1	P43577	159 aa	Predicted RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	YIP3	P53633	176 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	RRP17	Q04031	235 aa	Predicted RBP	0.7	□□□□□ -2.3
SHE9	YDR393W	DGA1	Q08650	418 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	YLL066W-B	Q8TGJ7	56 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	ODC2	Q99297	307 aa		0.7	□□□□□ -2.3
SHE9	YDR393W	POR1	P04840	283 aa	Known RBP	0.69	□□□□□ -2.3
SHE9	YDR393W	YCR101C	P25607	182 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	UBC8	P28263	218 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	SNF11	P38956	169 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	GPI2	P46961	280 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	YJR015W	P47090	510 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	YOL160W	Q08321	113 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	YNG1	Q08465	219 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	YLR307C-A	Q3E825	87 aa		0.69	□□□□□ -2.3
SHE9	YDR393W	RPS11A	P0CX47	156 aa	Known RBP	0.68	□□□□□ -2.3
SHE9	YDR393W	RPS11B	P0CX48	156 aa	Known RBP	0.68	□□□□□ -2.3
SHE9	YDR393W	ATP7	P30902	174 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	ARO7	P32178	256 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	SPS18	P32572	300 aa		0.68	□□□□□ -2.3
SHE9	YDR393W	GPI14	P47088	403 aa	Known RBP	0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 126.5 ms