RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeastyeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBF4YDR052C YHM2Q04013 314 aa4.34□□□□□ -1.71
DBF4YDR052C YOR097CQ12274 175 aaPredicted RBP4.34□□□□□ -1.71
DBF4YDR052C RPS21AP0C0V8 87 aaKnown RBP4.33□□□□□ -1.72
DBF4YDR052C YKL044WP36092 106 aa4.33□□□□□ -1.72
DBF4YDR052C YHR140WP38842 239 aa4.33□□□□□ -1.72
DBF4YDR052C SFT1P43682 97 aa4.33□□□□□ -1.72
DBF4YDR052C YGR219WP53307 113 aa4.33□□□□□ -1.72
DBF4YDR052C RAF1Q06891 181 aa4.33□□□□□ -1.72
DBF4YDR052C MIM1Q08176 113 aa4.33□□□□□ -1.72
DBF4YDR052C VMA3P25515 160 aa4.33□□□□□ -1.72
DBF4YDR052C RPL34BP40525 121 aaKnown RBP4.33□□□□□ -1.72
DBF4YDR052C YFH1Q07540 174 aa4.33□□□□□ -1.72
DBF4YDR052C TIM12P32830 109 aa4.32□□□□□ -1.72
DBF4YDR052C SRX1P36077 127 aa4.32□□□□□ -1.72
DBF4YDR052C FMP46P36141 133 aaKnown RBP4.32□□□□□ -1.72
DBF4YDR052C GLE2P40066 365 aa4.32□□□□□ -1.72
DBF4YDR052C COX12Q01519 83 aa4.32□□□□□ -1.72
DBF4YDR052C YMR317WQ04893 1140 aa4.32□□□□□ -1.72
DBF4YDR052C IRC25Q07951 179 aa4.32□□□□□ -1.72
DBF4YDR052C RFM1Q12192 310 aa4.32□□□□□ -1.72
DBF4YDR052C YLR412C-AQ3E742 68 aa4.32□□□□□ -1.72
DBF4YDR052C YBR255C-AQ3E776 120 aa4.32□□□□□ -1.72
DBF4YDR052C KSH1Q8TGJ3 72 aa4.32□□□□□ -1.72
DBF4YDR052C Q0182Q9ZZW1 134 aa4.32□□□□□ -1.72
DBF4YDR052C RPS16AP0CX51 143 aaKnown RBP4.31□□□□□ -1.72
DBF4YDR052C RPS16BP0CX52 143 aaKnown RBP4.31□□□□□ -1.72
DBF4YDR052C PAD1P33751 242 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
DBF4YDR052C MRPS5P33759 307 aa4.31□□□□□ -1.72
DBF4YDR052C YHL042WP38729 150 aa4.31□□□□□ -1.72
DBF4YDR052C YPL073CP40323 161 aa4.31□□□□□ -1.72
DBF4YDR052C MRX11Q03079 207 aa4.31□□□□□ -1.72
DBF4YDR052C SDC1Q03323 175 aa4.31□□□□□ -1.72
DBF4YDR052C YOR186WQ08560 144 aa4.31□□□□□ -1.72
DBF4YDR052C YPR064WQ12492 139 aa4.31□□□□□ -1.72
DBF4YDR052C YDR461C-AQ2V2P7 80 aa4.31□□□□□ -1.72
DBF4YDR052C YHR139C-AO13536 103 aa4.31□□□□□ -1.72
DBF4YDR052C YLR302CO13544 120 aa4.31□□□□□ -1.72
DBF4YDR052C TRP1P00912 224 aa4.31□□□□□ -1.72
DBF4YDR052C PIS1P06197 220 aaKnown RBP4.31□□□□□ -1.72
DBF4YDR052C TOM6P33448 61 aa4.31□□□□□ -1.72
DBF4YDR052C SMP1P38128 452 aa4.31□□□□□ -1.72
DBF4YDR052C PCL5P38794 229 aa4.31□□□□□ -1.72
DBF4YDR052C TIM18Q08749 192 aa4.31□□□□□ -1.72
DBF4YDR052C HUG1Q6Q5K6 68 aa4.31□□□□□ -1.72
DBF4YDR052C YCR006CP25350 157 aa4.3□□□□□ -1.72
DBF4YDR052C APS1P35181 156 aa4.3□□□□□ -1.72
DBF4YDR052C GPI18P38211 433 aa4.3□□□□□ -1.72
DBF4YDR052C SKI6P46948 246 aaPredicted RBP4.3□□□□□ -1.72
DBF4YDR052C YJR115WP47152 169 aa4.3□□□□□ -1.72
DBF4YDR052C HSK3P69852 69 aa4.3□□□□□ -1.72
DBF4YDR052C BOL1Q3E793 110 aa4.3□□□□□ -1.72
DBF4YDR052C FLO9P39712 1322 aa4.3□□□□□ -1.72
DBF4YDR052C RPS2P25443 254 aaKnown RBP4.3□□□□□ -1.72
DBF4YDR052C IMP1P28627 190 aa4.3□□□□□ -1.72
DBF4YDR052C YHL018WP38744 120 aaPredicted RBP4.3□□□□□ -1.72
DBF4YDR052C SVP26P38869 228 aa4.3□□□□□ -1.72
DBF4YDR052C LST8P41318 303 aa4.3□□□□□ -1.72
DBF4YDR052C FIP1P45976 327 aa4.3□□□□□ -1.72
DBF4YDR052C JJJ3P47138 172 aa4.3□□□□□ -1.72
DBF4YDR052C MET32Q12041 191 aa4.3□□□□□ -1.72
DBF4YDR052C YPL038W-AQ3E7B4 63 aa4.3□□□□□ -1.72
DBF4YDR052C RFA2P26754 273 aaKnown RBP4.29□□□□□ -1.72
DBF4YDR052C FZF1P32805 299 aa4.29□□□□□ -1.72
DBF4YDR052C DSE2P38844 325 aa4.29□□□□□ -1.72
DBF4YDR052C LYS1P38998 373 aaRIP-Chip data4.29□□□□□ -1.72 RIP-Chip
DBF4YDR052C RPS26AP39938 119 aaKnown RBP4.29□□□□□ -1.72
DBF4YDR052C RPS26BP39939 119 aaKnown RBP4.29□□□□□ -1.72
DBF4YDR052C YEL067CP39978 195 aa4.29□□□□□ -1.72
DBF4YDR052C HUA1P40325 198 aa4.29□□□□□ -1.72
DBF4YDR052C YPI1P43587 155 aa4.29□□□□□ -1.72
DBF4YDR052C MST27P53176 234 aa4.29□□□□□ -1.72
DBF4YDR052C RXT3Q07458 294 aa4.29□□□□□ -1.72
DBF4YDR052C Q0255P03881 472 aa4.28□□□□□ -1.72
DBF4YDR052C CSH1P38287 376 aa4.28□□□□□ -1.72
DBF4YDR052C MOT3P54785 490 aaKnown RBP4.28□□□□□ -1.72
DBF4YDR052C PET191Q02772 108 aa4.28□□□□□ -1.72
DBF4YDR052C SUT2Q12286 268 aa4.28□□□□□ -1.72
DBF4YDR052C YNL277W-AQ3E7Z0 62 aa4.28□□□□□ -1.72
DBF4YDR052C YER079WP40052 210 aaKnown RBP4.28□□□□□ -1.72
DBF4YDR052C MMS2P53152 137 aa4.28□□□□□ -1.72
DBF4YDR052C ROT1Q03691 256 aa4.28□□□□□ -1.72
DBF4YDR052C LSM6Q06406 86 aaKnown RBP4.28□□□□□ -1.72
DBF4YDR052C YMR175W-AQ3E766 64 aa4.28□□□□□ -1.72
DBF4YDR052C YLR365WQ7LIF2 110 aa4.28□□□□□ -1.72
DBF4YDR052C YRA2P36036 203 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
DBF4YDR052C GGC1P38988 300 aa4.27□□□□□ -1.73
DBF4YDR052C YAR029WP39549 74 aa4.27□□□□□ -1.73
DBF4YDR052C TDA7P53882 636 aaPredicted RBP4.27□□□□□ -1.73
DBF4YDR052C API2Q04413 109 aa4.27□□□□□ -1.73
DBF4YDR052C YMR321CQ04898 105 aa4.27□□□□□ -1.73
DBF4YDR052C HTL1Q9URQ5 78 aa4.27□□□□□ -1.73
DBF4YDR052C IES6P32617 166 aa4.27□□□□□ -1.73
DBF4YDR052C YNL208WP40159 199 aaKnown RBP4.27□□□□□ -1.73
DBF4YDR052C YLR281CQ05863 155 aa4.27□□□□□ -1.73
DBF4YDR052C GAT3Q07928 141 aa4.27□□□□□ -1.73
DBF4YDR052C ROX3P25046 220 aa4.26□□□□□ -1.73
DBF4YDR052C RRT13P40042 185 aa4.26□□□□□ -1.73
DBF4YDR052C YGR164WP53291 111 aa4.26□□□□□ -1.73
DBF4YDR052C YNR077CP53758 84 aa4.26□□□□□ -1.73
DBF4YDR052C YPR108W-AQ3E7B3 70 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms