RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C YGR219WP53307 113 aa5.89□□□□□ -1.47
CDC13YDL220C MOT3P54785 490 aaKnown RBP5.89□□□□□ -1.47
CDC13YDL220C KTI11Q3E840 82 aa5.89□□□□□ -1.47
CDC13YDL220C PAD1P33751 242 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
CDC13YDL220C YHM2Q04013 314 aa5.89□□□□□ -1.47
CDC13YDL220C YMR317WQ04893 1140 aa5.89□□□□□ -1.47
CDC13YDL220C MET32Q12041 191 aa5.89□□□□□ -1.47
CDC13YDL220C TRP1P00912 224 aa5.88□□□□□ -1.47
CDC13YDL220C QCR9P22289 66 aa5.88□□□□□ -1.47
CDC13YDL220C QRI5P32344 111 aa5.88□□□□□ -1.47
CDC13YDL220C REC114P32841 428 aa5.88□□□□□ -1.47
CDC13YDL220C SNT309Q06091 175 aaPredicted RBP5.88□□□□□ -1.47
CDC13YDL220C YOR097CQ12274 175 aaPredicted RBP5.88□□□□□ -1.47
CDC13YDL220C Q0182Q9ZZW1 134 aa5.88□□□□□ -1.47
CDC13YDL220C YRA2P36036 203 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
CDC13YDL220C DSE2P38844 325 aa5.88□□□□□ -1.47
CDC13YDL220C CIS3P47001 227 aa5.88□□□□□ -1.47
CDC13YDL220C KSH1Q8TGJ3 72 aa5.88□□□□□ -1.47
CDC13YDL220C TIM17P39515 158 aa5.87□□□□□ -1.47
CDC13YDL220C MST27P53176 234 aa5.87□□□□□ -1.47
CDC13YDL220C YPR064WQ12492 139 aa5.87□□□□□ -1.47
CDC13YDL220C YHR139C-AO13536 103 aa5.87□□□□□ -1.47
CDC13YDL220C UBC9P50623 157 aaPredicted RBP5.87□□□□□ -1.47
CDC13YDL220C YMR321CQ04898 105 aa5.87□□□□□ -1.47
CDC13YDL220C PIS1P06197 220 aaKnown RBP5.86□□□□□ -1.47
CDC13YDL220C GLE2P40066 365 aa5.86□□□□□ -1.47
CDC13YDL220C CYR1P08678 2026 aaKnown RBP5.86□□□□□ -1.47
CDC13YDL220C YSR3P23501 404 aa5.86□□□□□ -1.47
CDC13YDL220C RPP1P38786 293 aa5.86□□□□□ -1.47
CDC13YDL220C YER079WP40052 210 aaKnown RBP5.86□□□□□ -1.47
CDC13YDL220C YPL073CP40323 161 aa5.86□□□□□ -1.47
CDC13YDL220C LST8P41318 303 aa5.86□□□□□ -1.47
CDC13YDL220C SDC1Q03323 175 aa5.86□□□□□ -1.47
CDC13YDL220C YBR255C-AQ3E776 120 aa5.86□□□□□ -1.47
CDC13YDL220C RPS21AP0C0V8 87 aaKnown RBP5.85□□□□□ -1.47
CDC13YDL220C RPS16AP0CX51 143 aaKnown RBP5.85□□□□□ -1.47
CDC13YDL220C RPS16BP0CX52 143 aaKnown RBP5.85□□□□□ -1.47
CDC13YDL220C YHL042WP38729 150 aa5.85□□□□□ -1.47
CDC13YDL220C RXT3Q07458 294 aa5.85□□□□□ -1.47
CDC13YDL220C TIM18Q08749 192 aa5.85□□□□□ -1.47
CDC13YDL220C GPI18P38211 433 aa5.85□□□□□ -1.47
CDC13YDL220C YAR029WP39549 74 aa5.85□□□□□ -1.47
CDC13YDL220C YNL208WP40159 199 aaKnown RBP5.85□□□□□ -1.47
CDC13YDL220C YCR006CP25350 157 aa5.84□□□□□ -1.47
CDC13YDL220C TIM12P32830 109 aa5.84□□□□□ -1.47
CDC13YDL220C APS1P35181 156 aa5.84□□□□□ -1.47
CDC13YDL220C PCL5P38794 229 aa5.84□□□□□ -1.47
CDC13YDL220C FIP1P45976 327 aa5.84□□□□□ -1.47
CDC13YDL220C YOR186WQ08560 144 aa5.84□□□□□ -1.47
CDC13YDL220C YDL211CQ12121 372 aa5.84□□□□□ -1.47
CDC13YDL220C YKL044WP36092 106 aa5.84□□□□□ -1.47
CDC13YDL220C FMP46P36141 133 aaKnown RBP5.84□□□□□ -1.47
CDC13YDL220C SMP1P38128 452 aa5.84□□□□□ -1.47
CDC13YDL220C HUG1Q6Q5K6 68 aa5.84□□□□□ -1.47
CDC13YDL220C YHL018WP38744 120 aaPredicted RBP5.84□□□□□ -1.48
CDC13YDL220C SKI6P46948 246 aaPredicted RBP5.84□□□□□ -1.48
CDC13YDL220C API2Q04413 109 aa5.84□□□□□ -1.48
CDC13YDL220C GAT3Q07928 141 aa5.84□□□□□ -1.48
CDC13YDL220C IMP1P28627 190 aa5.83□□□□□ -1.48
CDC13YDL220C FZF1P32805 299 aa5.83□□□□□ -1.48
CDC13YDL220C LYS1P38998 373 aaRIP-Chip data5.83□□□□□ -1.48not detected
CDC13YDL220C TDA7P53882 636 aaPredicted RBP5.83□□□□□ -1.48
CDC13YDL220C MRX11Q03079 207 aa5.83□□□□□ -1.48
CDC13YDL220C YLR281CQ05863 155 aa5.83□□□□□ -1.48
CDC13YDL220C TOM6P33448 61 aa5.83□□□□□ -1.48
CDC13YDL220C YEL067CP39978 195 aa5.83□□□□□ -1.48
CDC13YDL220C VMA3P25515 160 aa5.82□□□□□ -1.48
CDC13YDL220C YPI1P43587 155 aa5.82□□□□□ -1.48
CDC13YDL220C MMS2P53152 137 aa5.82□□□□□ -1.48
CDC13YDL220C YDR209CQ03480 137 aa5.82□□□□□ -1.48
CDC13YDL220C YLR412C-AQ3E742 68 aa5.82□□□□□ -1.48
CDC13YDL220C YPL038W-AQ3E7B4 63 aa5.82□□□□□ -1.48
CDC13YDL220C PET191Q02772 108 aa5.81□□□□□ -1.48
CDC13YDL220C YNL277W-AQ3E7Z0 62 aa5.81□□□□□ -1.48
CDC13YDL220C RFA2P26754 273 aaKnown RBP5.81□□□□□ -1.48
CDC13YDL220C COX12Q01519 83 aa5.81□□□□□ -1.48
CDC13YDL220C FPR2P32472 135 aa5.8□□□□□ -1.48
CDC13YDL220C SRX1P36077 127 aa5.8□□□□□ -1.48
CDC13YDL220C RRT13P40042 185 aa5.8□□□□□ -1.48
CDC13YDL220C LSM6Q06406 86 aaKnown RBP5.8□□□□□ -1.48
CDC13YDL220C MBB1P39534 108 aa5.8□□□□□ -1.48
CDC13YDL220C SUT2Q12286 268 aa5.8□□□□□ -1.48
CDC13YDL220C BOL1Q3E793 110 aa5.8□□□□□ -1.48
CDC13YDL220C RRT15Q3E811 62 aa5.8□□□□□ -1.48
CDC13YDL220C HTL1Q9URQ5 78 aa5.8□□□□□ -1.48
CDC13YDL220C MRS3P10566 314 aa5.79□□□□□ -1.48
CDC13YDL220C YFH1Q07540 174 aa5.79□□□□□ -1.48
CDC13YDL220C IES6P32617 166 aa5.79□□□□□ -1.48
CDC13YDL220C CSH1P38287 376 aa5.79□□□□□ -1.48
CDC13YDL220C SVP26P38869 228 aa5.79□□□□□ -1.48
CDC13YDL220C PEX22P39718 180 aa5.79□□□□□ -1.48
CDC13YDL220C Q0255P03881 472 aa5.78□□□□□ -1.48
CDC13YDL220C MRPL31P14063 131 aaPredicted RBP5.78□□□□□ -1.48
CDC13YDL220C ROX3P25046 220 aa5.78□□□□□ -1.48
CDC13YDL220C PET8P38921 284 aa5.78□□□□□ -1.48
CDC13YDL220C YPL261CQ08976 102 aa5.78□□□□□ -1.48
CDC13YDL220C SWS2P53937 143 aa5.78□□□□□ -1.48
CDC13YDL220C ROT1Q03691 256 aa5.78□□□□□ -1.48
CDC13YDL220C YMR175W-AQ3E766 64 aa5.78□□□□□ -1.48
CDC13YDL220C YBL081WP38180 368 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms